Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 U3.9-201ENST00000363823 204 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 SNORA80A-201ENST00000363922 136 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 RNU1-57P-201ENST00000384491 166 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 MIR634-201ENST00000385208 97 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 RNU6-1328P-201ENST00000410938 106 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 EBAG9P1-201ENST00000418955 543 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 AIMP1P2-201ENST00000425294 312 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 HMGN1P18-201ENST00000457642 277 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 RNU6-1007P-201ENST00000516586 107 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 SNORA64.4-201ENST00000516632 81 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 RNU6-344P-201ENST00000516635 111 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 HSPE1P18-201ENST00000517602 280 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 AC103810.1-201ENST00000579873 453 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 AC010332.2-201ENST00000613083 1904 ntBASIC3.2□□□□□ -1.9
RNF38Q9H0F5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RNF38Q9H0F5 snoU2_19.1-201ENST00000362361 80 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 Y_RNA.261-201ENST00000364631 102 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 SNORA72.4-201ENST00000384174 132 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 SNORA8.3-201ENST00000384679 139 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 SNORA12-201ENST00000391162 147 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 AL513477.1-202ENST00000417061 214 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 COTL1P1-201ENST00000422309 375 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF38Q9H0F5 AC010409.1-201ENST00000487382 476 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 RNU2-44P-201ENST00000516795 194 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 RNU6-453P-201ENST00000516819 85 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 RNU6-971P-201ENST00000516920 106 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 MIR4431-201ENST00000579990 94 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 AL078604.3-201ENST00000615580 211 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 AL137790.1-201ENST00000634283 177 ntBASIC3.19□□□□□ -1.9
RNF38Q9H0F5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF38Q9H0F5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.19□□□□□ -1.9
RNF38Q9H0F5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.19□□□□□ -1.9
RNF38Q9H0F5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF38Q9H0F5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNF38Q9H0F5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RNF38Q9H0F5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF38Q9H0F5 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF38Q9H0F5 MICF-203ENST00000432679 129 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 AC245047.8-201ENST00000456455 284 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 snoU13.14-201ENST00000459372 104 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 AC107027.2-201ENST00000512197 115 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 SCARNA8-201ENST00000515924 131 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.18□□□□□ -1.9
RNF38Q9H0F5 AC022616.8-201ENST00000533569 253 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF38Q9H0F5 MIR7157-201ENST00000635801 60 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
RNF38Q9H0F5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF38Q9H0F5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF38Q9H0F5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF38Q9H0F5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF38Q9H0F5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF38Q9H0F5 AC138915.1-201ENST00000565427 1685 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF38Q9H0F5 Y_RNA.341-201ENST00000365341 102 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 RNU6-969P-201ENST00000383900 105 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 MIR218-1-201ENST00000384999 110 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 MIR626-201ENST00000385032 94 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 SNORA40-201ENST00000388090 126 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 AC006461.1-201ENST00000412637 326 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 TOMM22P2-201ENST00000430735 237 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF38Q9H0F5 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 SCARNA3-201ENST00000517097 143 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.17□□□□□ -1.9
RNF38Q9H0F5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF38Q9H0F5 MIR3199-1-201ENST00000582434 88 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 Y_RNA.802-201ENST00000614892 130 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 AC008873.1-201ENST00000625051 138 ntBASIC3.17□□□□□ -1.9
RNF38Q9H0F5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF38Q9H0F5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF38Q9H0F5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF38Q9H0F5 RNU6-655P-201ENST00000362858 107 ntBASIC3.16□□□□□ -1.9
RNF38Q9H0F5 SNORD56.3-201ENST00000363507 71 ntBASIC3.16□□□□□ -1.9
RNF38Q9H0F5 RNU6-103P-201ENST00000363686 107 ntBASIC3.16□□□□□ -1.9
RNF38Q9H0F5 MIR513C-201ENST00000401352 84 ntBASIC3.16□□□□□ -1.9
RNF38Q9H0F5 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
RNF38Q9H0F5 RPS12P18-201ENST00000442381 270 ntBASIC3.16□□□□□ -1.9
RNF38Q9H0F5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF38Q9H0F5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF38Q9H0F5 RNU7-121P-201ENST00000516604 62 ntBASIC3.16□□□□□ -1.9
RNF38Q9H0F5 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
RNF38Q9H0F5 AC109810.1-201ENST00000534066 224 ntBASIC3.16□□□□□ -1.9
RNF38Q9H0F5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.16□□□□□ -1.9
RNF38Q9H0F5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms