Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 Y_RNA.96-201ENST00000363092 109 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 Y_RNA.437-201ENST00000384113 113 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 RNU6-24P-201ENST00000384440 107 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 RNA5SP397-201ENST00000391323 118 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 MIR548O-201ENST00000408583 114 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 RN7SKP213-201ENST00000410746 298 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 HMGN2P31-201ENST00000432430 273 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 RN7SL329P-201ENST00000467740 299 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 AC006064.5-201ENST00000541782 248 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 MIR4778-201ENST00000577635 80 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 MIR4694-201ENST00000578534 80 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 MIR5588-201ENST00000581890 63 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 AC244205.2-202ENST00000635781 342 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 MIR4662A-201ENST00000637499 67 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP4Q9BWG4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
SSBP4Q9BWG4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SSBP4Q9BWG4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SSBP4Q9BWG4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 MIR126-201ENST00000362291 85 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 RNU6-170P-201ENST00000362832 104 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.155-201ENST00000363632 101 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 RNU6-979P-201ENST00000383896 107 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 MIR659-201ENST00000384963 97 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 RNU6-1186P-201ENST00000410429 97 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 AC010401.1-201ENST00000463867 348 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 RN7SL738P-201ENST00000470264 297 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 AC113410.1-201ENST00000505029 247 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 RNU6-1291P-201ENST00000516591 104 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 IGKV1-32-201ENST00000519290 311 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 MIR4666B-201ENST00000578142 81 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 MIR3683-201ENST00000580847 82 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 MIR4737-201ENST00000583979 81 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 MIR4765-201ENST00000585007 77 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 AC012531.4-201ENST00000616509 177 ntBASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.15□□□□□ -1.91
SSBP4Q9BWG4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 MFSD8-216ENST00000641147 4009 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 Y_RNA.313-201ENST00000365095 103 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 SNORA37-201ENST00000384504 129 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 RNU6-402P-201ENST00000410678 103 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 MRPL35P3-201ENST00000421557 364 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 AC025750.2-201ENST00000442609 450 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 SNORA4.4-201ENST00000515921 135 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 RNA5SP112-201ENST00000515937 99 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 IGLV2-28-201ENST00000520681 304 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 AC087385.3-201ENST00000620477 187 ntBASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
SSBP4Q9BWG4 AC018630.2-201ENST00000534866 2403 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 RNU6-832P-201ENST00000363319 107 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 SNORD115-28-201ENST00000363931 81 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 RNA5SP175-201ENST00000364275 119 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 SNORA18-201ENST00000384416 132 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 AC099677.2-201ENST00000436385 175 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 HMGN2P34-201ENST00000437647 269 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 AL162591.2-201ENST00000449634 317 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 HMGN2P18-201ENST00000450680 270 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 RNU7-80P-201ENST00000459562 61 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 RNU7-171P-201ENST00000459581 62 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 RAC1P2-201ENST00000511164 579 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.13□□□□□ -1.91
SSBP4Q9BWG4 HMGN2P6-201ENST00000551091 273 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms