Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.24□□□□□ -2.05
NPAS1Q99742 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.24□□□□□ -2.05
NPAS1Q99742 AC091932.3-201ENST00000624223 323 ntBASIC2.24□□□□□ -2.05
NPAS1Q99742 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.23□□□□□ -2.05
NPAS1Q99742 MIR449A-201ENST00000362113 91 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 RNA5SP289-201ENST00000362332 137 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 Y_RNA.176-201ENST00000363815 109 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 RNU6-324P-201ENST00000363957 106 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 Y_RNA.230-201ENST00000364348 109 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 RNU6-1175P-201ENST00000365200 107 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 RNU11-3P-201ENST00000391111 133 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 Y_RNA.602-201ENST00000410535 92 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 AL390729.2-201ENST00000416137 156 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.23□□□□□ -2.05
NPAS1Q99742 AC008134.1-201ENST00000420943 193 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 MTCO1P44-201ENST00000441935 243 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 AL357134.1-201ENST00000445848 426 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.23□□□□□ -2.05
NPAS1Q99742 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.23□□□□□ -2.05
NPAS1Q99742 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.23□□□□□ -2.05
NPAS1Q99742 AL590240.4-201ENST00000616908 390 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NPAS1Q99742 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.23□□□□□ -2.05
NPAS1Q99742 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.22□□□□□ -2.05
NPAS1Q99742 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.22□□□□□ -2.05
NPAS1Q99742 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPAS1Q99742 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPAS1Q99742 RNU6-1309P-201ENST00000363305 108 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 RNA5SP456-201ENST00000364002 114 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 Y_RNA.214-201ENST00000364201 112 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 SNORA40.19-201ENST00000390846 128 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 RPL23AP36-201ENST00000413895 458 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPAS1Q99742 ELOCP20-201ENST00000422460 345 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.22□□□□□ -2.05
NPAS1Q99742 DYNLT3P2-201ENST00000442517 295 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.22□□□□□ -2.05
NPAS1Q99742 RNU6-155P-201ENST00000516347 100 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 RNA5SP137-201ENST00000516833 135 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.22□□□□□ -2.05
NPAS1Q99742 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.22□□□□□ -2.05
NPAS1Q99742 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.22□□□□□ -2.05
NPAS1Q99742 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.22□□□□□ -2.05
NPAS1Q99742 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NPAS1Q99742 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
NPAS1Q99742 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
NPAS1Q99742 Y_RNA.64-201ENST00000362845 102 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 SNORD114-6-201ENST00000364393 72 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 RNU6-1240P-201ENST00000365155 104 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 Y_RNA.331-201ENST00000365267 102 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 Y_RNA.462-201ENST00000384268 102 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 SNORA67.4-201ENST00000384688 142 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 RNU4-30P-201ENST00000410245 143 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.21□□□□□ -2.06
NPAS1Q99742 RNU6-221P-201ENST00000459541 99 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 RNU6-1041P-201ENST00000516254 102 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.21□□□□□ -2.06
NPAS1Q99742 MIR5092-201ENST00000583139 88 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 U4.3-201ENST00000621047 82 ntBASIC2.21□□□□□ -2.06
NPAS1Q99742 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NPAS1Q99742 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
NPAS1Q99742 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NPAS1Q99742 SNORD113-8-201ENST00000363497 74 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 Y_RNA.149-201ENST00000363558 117 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 SNORA3A-201ENST00000364113 130 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 RNA5SP493-201ENST00000364115 91 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 RNU6-1109P-201ENST00000391187 107 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 AL359511.1-201ENST00000402970 211 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.2□□□□□ -2.06
NPAS1Q99742 BX510359.4-201ENST00000423750 193 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 HMGN2P34-201ENST00000437647 269 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 SEPT14P8-201ENST00000508026 178 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.2□□□□□ -2.06
NPAS1Q99742 RNU6-1146P-201ENST00000516282 102 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 AC025647.1-201ENST00000517879 253 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 SUMO2P18-201ENST00000518873 252 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 AC055872.1-201ENST00000570978 278 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.2□□□□□ -2.06
NPAS1Q99742 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.2□□□□□ -2.06
NPAS1Q99742 MIR203B-201ENST00000636080 86 ntBASIC2.2□□□□□ -2.06
NPAS1Q99742 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.2□□□□□ -2.06
NPAS1Q99742 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NPAS1Q99742 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NPAS1Q99742 MIR21-201ENST00000362134 72 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 RNU1-58P-201ENST00000362413 163 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 RNU4-82P-201ENST00000362443 140 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 Y_RNA.101-201ENST00000363154 102 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 RNU6-1164P-201ENST00000364428 107 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 SNORD114-30-201ENST00000364448 72 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 Y_RNA.446-201ENST00000384178 104 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 SNORD63-201ENST00000384262 68 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.19□□□□□ -2.06
NPAS1Q99742 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.19□□□□□ -2.06
NPAS1Q99742 AL513328.1-201ENST00000446460 224 ntBASIC2.19□□□□□ -2.06
NPAS1Q99742 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
NPAS1Q99742 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.19□□□□□ -2.06
NPAS1Q99742 RNU6-856P-201ENST00000516959 98 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms