Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-653P-201ENST00000363074 106 ntBASIC2.58□□□□□ -2
TIMP4Q99727 RNA5SP139-201ENST00000364340 117 ntBASIC2.58□□□□□ -2
TIMP4Q99727 U8.9-201ENST00000365667 134 ntBASIC2.58□□□□□ -2
TIMP4Q99727 RNU6-763P-201ENST00000390865 106 ntBASIC2.58□□□□□ -2
TIMP4Q99727 MTCO2P33-201ENST00000402100 465 ntBASIC2.58□□□□□ -2
TIMP4Q99727 AC105272.1-201ENST00000438604 198 ntBASIC2.58□□□□□ -2
TIMP4Q99727 RN7SL297P-201ENST00000483161 293 ntBASIC2.58□□□□□ -2
TIMP4Q99727 RAC1P5-201ENST00000512182 576 ntBASIC2.58□□□□□ -2
TIMP4Q99727 RN7SKP132-201ENST00000516001 208 ntBASIC2.58□□□□□ -2
TIMP4Q99727 MTND5P41-201ENST00000517498 206 ntBASIC2.58□□□□□ -2
TIMP4Q99727 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.58□□□□□ -2
TIMP4Q99727 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.58□□□□□ -2
TIMP4Q99727 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.58□□□□□ -2
TIMP4Q99727 AC009127.3-201ENST00000570531 403 ntBASIC2.58□□□□□ -2
TIMP4Q99727 MIR3144-201ENST00000579460 79 ntBASIC2.58□□□□□ -2
TIMP4Q99727 MIR4765-201ENST00000585007 77 ntBASIC2.58□□□□□ -2
TIMP4Q99727 AC008739.2-201ENST00000597006 317 ntBASIC2.58□□□□□ -2
TIMP4Q99727 RPL30P11-203ENST00000598995 310 ntBASIC2.58□□□□□ -2
TIMP4Q99727 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.58□□□□□ -2
TIMP4Q99727 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TIMP4Q99727 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.57□□□□□ -2
TIMP4Q99727 RNU6-1305P-201ENST00000364353 104 ntBASIC2.57□□□□□ -2
TIMP4Q99727 MIR887-201ENST00000401258 79 ntBASIC2.57□□□□□ -2
TIMP4Q99727 AL031003.1-201ENST00000404229 172 ntBASIC2.57□□□□□ -2
TIMP4Q99727 EIF4EP4-201ENST00000424916 578 ntBASIC2.57□□□□□ -2
TIMP4Q99727 AC087499.2-201ENST00000432861 149 ntBASIC2.57□□□□□ -2
TIMP4Q99727 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.57□□□□□ -2
TIMP4Q99727 AC140059.1-201ENST00000489238 361 ntBASIC2.57□□□□□ -2
TIMP4Q99727 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.57□□□□□ -2
TIMP4Q99727 RNA5SP356-201ENST00000515972 94 ntBASIC2.57□□□□□ -2
TIMP4Q99727 MIR449C-201ENST00000516047 92 ntBASIC2.57□□□□□ -2
TIMP4Q99727 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.57□□□□□ -2
TIMP4Q99727 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.57□□□□□ -2
TIMP4Q99727 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.57□□□□□ -2
TIMP4Q99727 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
TIMP4Q99727 AL359854.1-201ENST00000614203 1594 ntBASIC2.57□□□□□ -2
TIMP4Q99727 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
TIMP4Q99727 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.56□□□□□ -2
TIMP4Q99727 SNORD115-30-201ENST00000364117 82 ntBASIC2.56□□□□□ -2
TIMP4Q99727 Y_RNA.398-201ENST00000383952 99 ntBASIC2.56□□□□□ -2
TIMP4Q99727 MIR548B-201ENST00000385247 97 ntBASIC2.56□□□□□ -2
TIMP4Q99727 SNORA40.19-201ENST00000390846 128 ntBASIC2.56□□□□□ -2
TIMP4Q99727 RNU2-2P-201ENST00000410396 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 RNU6-1135P-201ENST00000411083 103 ntBASIC2.56□□□□□ -2
TIMP4Q99727 AL606753.1-201ENST00000427435 87 ntBASIC2.56□□□□□ -2
TIMP4Q99727 Z96811.1-201ENST00000445880 108 ntBASIC2.56□□□□□ -2
TIMP4Q99727 RN7SL499P-201ENST00000481141 276 ntBASIC2.56□□□□□ -2
TIMP4Q99727 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.56□□□□□ -2
TIMP4Q99727 MIR5692C2-201ENST00000577959 77 ntBASIC2.56□□□□□ -2
TIMP4Q99727 AC023043.3-201ENST00000593113 385 ntBASIC2.56□□□□□ -2
TIMP4Q99727 RNU2-4P-201ENST00000606190 192 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.15-201ENST00000611544 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.16-201ENST00000613119 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.12-201ENST00000613778 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.9-201ENST00000615427 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.11-201ENST00000616345 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.2-201ENST00000616535 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.3-201ENST00000617785 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.19-201ENST00000618602 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 RNU2-1-201ENST00000618664 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.6-201ENST00000619225 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.5-201ENST00000619465 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 U2.10-201ENST00000620268 191 ntBASIC2.56□□□□□ -2
TIMP4Q99727 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.56□□□□□ -2
TIMP4Q99727 AC134026.1-201ENST00000623249 2239 ntBASIC2.56□□□□□ -2
TIMP4Q99727 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TIMP4Q99727 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.55□□□□□ -2
TIMP4Q99727 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.55□□□□□ -2
TIMP4Q99727 RNU6-1048P-201ENST00000364054 107 ntBASIC2.55□□□□□ -2
TIMP4Q99727 RNU6-801P-201ENST00000364087 105 ntBASIC2.55□□□□□ -2
TIMP4Q99727 SNORA67.2-201ENST00000384300 149 ntBASIC2.55□□□□□ -2
TIMP4Q99727 Y_RNA.500-201ENST00000384466 111 ntBASIC2.55□□□□□ -2
TIMP4Q99727 Y_RNA.571-201ENST00000384753 98 ntBASIC2.55□□□□□ -2
TIMP4Q99727 RNU6-394P-201ENST00000410735 107 ntBASIC2.55□□□□□ -2
TIMP4Q99727 AL139281.1-201ENST00000422120 335 ntBASIC2.55□□□□□ -2
TIMP4Q99727 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
TIMP4Q99727 MRPS36P2-201ENST00000512569 299 ntBASIC2.55□□□□□ -2
TIMP4Q99727 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.55□□□□□ -2
TIMP4Q99727 RNU7-200P-201ENST00000516105 62 ntBASIC2.55□□□□□ -2
TIMP4Q99727 SCARNA17.1-201ENST00000516211 143 ntBASIC2.55□□□□□ -2
TIMP4Q99727 SCARNA17.2-201ENST00000516334 143 ntBASIC2.55□□□□□ -2
TIMP4Q99727 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
TIMP4Q99727 RNU6-1098P-201ENST00000516772 96 ntBASIC2.55□□□□□ -2
TIMP4Q99727 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.55□□□□□ -2
TIMP4Q99727 AC138915.1-201ENST00000565427 1685 ntBASIC2.55□□□□□ -2
TIMP4Q99727 AC103810.1-201ENST00000579873 453 ntBASIC2.55□□□□□ -2
TIMP4Q99727 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.55□□□□□ -2
TIMP4Q99727 SCARNA17.4-201ENST00000614296 143 ntBASIC2.55□□□□□ -2
TIMP4Q99727 UCA1.1-201ENST00000620952 75 ntBASIC2.55□□□□□ -2
TIMP4Q99727 AC110079.1-202ENST00000635213 138 ntBASIC2.55□□□□□ -2
TIMP4Q99727 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TIMP4Q99727 RNU4-10P-201ENST00000364383 140 ntBASIC2.54□□□□□ -2
TIMP4Q99727 SNORD21-201ENST00000383953 95 ntBASIC2.54□□□□□ -2
TIMP4Q99727 Y_RNA.435-201ENST00000384095 112 ntBASIC2.54□□□□□ -2
TIMP4Q99727 MIR512-1-201ENST00000384913 84 ntBASIC2.54□□□□□ -2
TIMP4Q99727 SNORA26.5-201ENST00000391215 123 ntBASIC2.54□□□□□ -2
TIMP4Q99727 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.54□□□□□ -2
TIMP4Q99727 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.54□□□□□ -2
TIMP4Q99727 TOMM22P2-201ENST00000430735 237 ntBASIC2.54□□□□□ -2
TIMP4Q99727 AL135790.2-201ENST00000437701 267 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 242.7 ms