Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 RNU6-948P-201ENST00000516374 107 ntBASIC1.98□□□□□ -2.09
NUDCD1Q96RS6 RNU7-4P-201ENST00000516961 62 ntBASIC1.98□□□□□ -2.09
NUDCD1Q96RS6 AC083806.3-201ENST00000614016 455 ntBASIC1.98□□□□□ -2.09
NUDCD1Q96RS6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NUDCD1Q96RS6 RNU5F-3P-201ENST00000363767 117 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 Y_RNA.813-201ENST00000364639 102 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 RNU6-708P-201ENST00000384217 107 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 RNU6-1235P-201ENST00000384559 107 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 Y_RNA.605-201ENST00000410577 105 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 MTND4P28-201ENST00000426217 387 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 AC099799.1-201ENST00000439809 192 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 RPL23AP6-201ENST00000446637 472 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 RNU6-498P-201ENST00000459468 107 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 AC114982.1-201ENST00000469402 321 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 Y_RNA.661-201ENST00000516003 99 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 RNU6-1041P-201ENST00000516254 102 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 AL080274.1-201ENST00000605565 220 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 AC006001.4-201ENST00000622243 395 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 AC091925.1-201ENST00000623204 462 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 MTND4P29-201ENST00000503122 1372 ntBASIC1.97□□□□□ -2.09
NUDCD1Q96RS6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 RNU6-797P-201ENST00000363101 109 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 U3.8-201ENST00000363675 217 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.428-201ENST00000384078 102 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.535-201ENST00000384612 99 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 ELOCP21-201ENST00000412558 336 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 AC016909.1-201ENST00000415916 166 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 UBE2V1P7-201ENST00000446395 340 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 UBL5P3-201ENST00000475112 231 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 RNU6-107P-201ENST00000516643 102 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 RN7SKP49-201ENST00000516675 260 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 SNORD116.3-201ENST00000517176 78 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 SNRPGP19-201ENST00000603826 189 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 CYP2C61P-201ENST00000604072 290 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 snoZ196.1-201ENST00000625269 89 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.96□□□□□ -2.1
NUDCD1Q96RS6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.197-201ENST00000364004 102 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.595-201ENST00000410403 105 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 SNORD12B-201ENST00000410433 91 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 AC099677.2-201ENST00000436385 175 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 MTND2P29-201ENST00000438595 412 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 UQCRBP2-201ENST00000447827 297 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 RPL23AP3-201ENST00000453844 468 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 AC144568.1-201ENST00000520139 137 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 AC092447.9-201ENST00000603395 144 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 U2.1-201ENST00000618978 145 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.95□□□□□ -2.1
NUDCD1Q96RS6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 RNU6-862P-201ENST00000362804 105 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.252-201ENST00000364556 101 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 SNORD42.2-201ENST00000365570 69 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 RNU6-308P-201ENST00000390957 107 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 AC019129.1-201ENST00000403786 261 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 AL117342.1-201ENST00000404861 406 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 MIR1185-2-201ENST00000408687 86 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 RNU6-221P-201ENST00000459541 99 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 AC011406.1-201ENST00000512440 370 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 RNU2-34P-201ENST00000516534 121 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 AC005786.1-201ENST00000588553 154 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 uc_338.22-201ENST00000622722 187 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 AL160413.1-201ENST00000622780 310 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 MIR4272-201ENST00000635924 64 ntBASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NUDCD1Q96RS6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.80-201ENST00000362996 102 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 RNU6-926P-201ENST00000384075 107 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 Y_RNA.485-201ENST00000384395 102 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 SNORA48.1-201ENST00000390879 135 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 AC018865.2-201ENST00000423631 129 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 AC074290.1-201ENST00000448883 135 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 snoU13.15-201ENST00000459407 104 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 YWHAEP4-201ENST00000505390 198 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 SNORA40.9-201ENST00000515895 93 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 RNU6-1170P-201ENST00000515974 106 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 RNU6-976P-201ENST00000516086 111 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 RNU4-77P-201ENST00000516692 156 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 AC025647.1-201ENST00000517879 253 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 SUMO2P18-201ENST00000518873 252 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 AP002001.1-203ENST00000534002 267 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 AC006600.1-201ENST00000572529 153 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 MIR5094-201ENST00000578766 85 ntBASIC1.93□□□□□ -2.1
NUDCD1Q96RS6 AC007485.1-201ENST00000616755 206 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms