Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.11-201ENST00000362375 109 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 RNU6-873P-201ENST00000363833 107 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 RNU4-76P-201ENST00000364509 141 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 AC092423.1-201ENST00000430165 186 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 RPS23P5-201ENST00000495419 428 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 AC105758.1-201ENST00000506038 399 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 AC093259.1-201ENST00000509755 300 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 RNU6-1170P-201ENST00000515974 106 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 RNU6-344P-201ENST00000516635 111 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 AC087441.2-201ENST00000529141 262 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.9□□□□□ -2.11
NECTIN4Q96NY8 MIR340-201ENST00000362125 95 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 RNU1-62P-201ENST00000362599 164 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 SNORD31B-201ENST00000364977 69 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 RNU6-474P-201ENST00000384243 107 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 RNU6-541P-201ENST00000384709 110 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 MIR1262-201ENST00000408276 93 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.592-201ENST00000410274 109 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 RNU2-20P-201ENST00000410425 191 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 RNA5SP504-201ENST00000410676 117 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 AC244636.1-201ENST00000421152 228 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 HMGN2P19-201ENST00000425149 265 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 AC099799.1-201ENST00000439809 192 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 CHEK2P4-201ENST00000450340 246 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 AC125232.2-201ENST00000592457 143 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
NECTIN4Q96NY8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 MIR369-201ENST00000362155 70 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.99-201ENST00000363138 105 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 RNU6-280P-201ENST00000364145 104 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 RNU1-115P-201ENST00000365329 160 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.358-201ENST00000365491 99 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 MIR329-1-201ENST00000385028 80 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 MIR625-201ENST00000385047 85 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 RNU11-3P-201ENST00000391111 133 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 USP9YP16-201ENST00000430287 407 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 USP9YP23-201ENST00000455085 407 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 AC016925.1-201ENST00000458303 298 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 RNU7-14P-201ENST00000459331 62 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 SNORA25.14-201ENST00000516481 132 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 RNU5F-4P-201ENST00000516581 114 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.701-201ENST00000516812 110 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 RNU7-4P-201ENST00000516961 62 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 MIR2355-201ENST00000517199 87 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 MIR5006-201ENST00000583027 110 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 MIR8081-201ENST00000611533 95 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 AC090971.5-201ENST00000621102 293 ntBASIC1.88□□□□□ -2.11
NECTIN4Q96NY8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 CENPCP1-201ENST00000533085 2578 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.138-201ENST00000363462 102 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 RNU4-42P-201ENST00000364738 142 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.428-201ENST00000384078 102 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 RNU6-1145P-201ENST00000384246 107 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 RNU6-318P-201ENST00000384283 103 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 SNORA8-201ENST00000384574 139 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 MIR518E-201ENST00000385252 88 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 AL357139.1-201ENST00000407792 426 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 AL445305.1-201ENST00000432577 575 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 MTCYBP6-201ENST00000441810 138 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 RNA5SP490-201ENST00000517141 136 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 SNORD116.3-201ENST00000517176 78 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 AK6P2-201ENST00000549020 471 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 RRN3P3-201ENST00000549207 578 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
NECTIN4Q96NY8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 RNU1-58P-201ENST00000362413 163 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 Y_RNA.31-201ENST00000362574 102 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 RNU6-545P-201ENST00000362681 104 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 RNU6-743P-201ENST00000364151 106 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 SNORA69.1-201ENST00000390904 137 ntBASIC1.86□□□□□ -2.11
NECTIN4Q96NY8 MIR300-201ENST00000401138 83 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms