Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 AC078899.2-201ENST00000595282 212 ntBASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 MIR432-201ENST00000606207 94 ntBASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 Z95331.1-201ENST00000623075 23112 ntBASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MS4A4AQ96JQ5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 AL022322.2-201ENST00000624072 20397 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 RNU6-1084P-201ENST00000362498 107 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 SNORA14A-201ENST00000364773 135 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 snoU2-30.1-201ENST00000365012 70 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 SNORD115-35-201ENST00000365122 82 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 RNA5SP22-201ENST00000365393 109 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 AC244505.4-201ENST00000434905 287 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 SSXP5-201ENST00000443473 287 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 RPS26P28-201ENST00000470806 348 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 RPS23P4-201ENST00000487908 423 ntBASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
MS4A4AQ96JQ5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 RNU6-776P-201ENST00000364403 104 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 RNU6-1022P-201ENST00000365049 104 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 MIR218-2-201ENST00000385006 110 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 RNU6-887P-201ENST00000410660 100 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 BTF3P4-201ENST00000418852 495 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 AC009969.1-201ENST00000438726 172 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 AC139453.2-201ENST00000487255 133 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 AC093259.1-201ENST00000509755 300 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 AC104619.4-201ENST00000510773 249 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 YPEL5P2-201ENST00000605553 359 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 U3.45-201ENST00000607547 219 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.59□□□□□ -1.67
MS4A4AQ96JQ5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
MS4A4AQ96JQ5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
MS4A4AQ96JQ5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
MS4A4AQ96JQ5 AC008079.2-201ENST00000623543 20396 ntBASIC4.59□□□□□ -1.68
MS4A4AQ96JQ5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
MS4A4AQ96JQ5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
MS4A4AQ96JQ5 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 SNORD35B-201ENST00000363660 87 ntBASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 RNU6-268P-201ENST00000364174 107 ntBASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 Y_RNA.336-201ENST00000365307 109 ntBASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 NDUFB4P4-201ENST00000404822 243 ntBASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 GNG5P5-201ENST00000420444 220 ntBASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 AC060773.1-201ENST00000421698 310 ntBASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 SNORA59A-201ENST00000459326 152 ntBASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 RNU1-142P-201ENST00000516682 145 ntBASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 RNU7-128P-201ENST00000517247 62 ntBASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.58□□□□□ -1.68
MS4A4AQ96JQ5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 RNA5SP97-201ENST00000365006 84 ntBASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 Y_RNA.332-201ENST00000365271 113 ntBASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 Y_RNA.377-201ENST00000365644 108 ntBASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 SNRPGP3-201ENST00000469405 227 ntBASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 MIR4762-201ENST00000585261 75 ntBASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 AC064859.1-201ENST00000624741 174 ntBASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.57□□□□□ -1.68
MS4A4AQ96JQ5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 Y_RNA.95-201ENST00000363079 95 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 RNU6-219P-201ENST00000364728 107 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 RNA5SP252-201ENST00000391131 119 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 RNA5SP239-201ENST00000410218 129 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 RN7SKP200-201ENST00000410564 320 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 RNU2-37P-201ENST00000410695 177 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 Z92545.1-201ENST00000411782 234 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 RPL32P35-201ENST00000415214 394 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 MIR5187-201ENST00000583479 76 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 AC244505.7-201ENST00000599675 272 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 MIR1255B1-201ENST00000636325 63 ntBASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
MS4A4AQ96JQ5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.55□□□□□ -1.68
MS4A4AQ96JQ5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms