Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNU6-861P-201ENST00000516745 106 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 RNU1-117P-201ENST00000517041 158 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 RPL17P51-201ENST00000605218 238 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 AL008718.3-201ENST00000610217 321 ntBASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.2□□□□□ -1.9
CHAMP1Q96JM3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 SNORA9.2-201ENST00000365361 133 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 Y_RNA.361-201ENST00000365515 120 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 RNU6-211P-201ENST00000384047 107 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 MIR548B-201ENST00000385247 97 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 RNU6-493P-201ENST00000391321 108 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 MIR548M-201ENST00000408260 86 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 AL135790.2-201ENST00000437701 267 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 AC074198.2-201ENST00000508153 258 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 RNA5SP112-201ENST00000515937 99 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 RNA5SP367-201ENST00000516557 118 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 RNU6-1098P-201ENST00000516772 96 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 AC087441.2-201ENST00000529141 262 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 MIR4319-201ENST00000577285 85 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 ZNF861P-201ENST00000588126 639 ntBASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHAMP1Q96JM3 RNU6-1272P-201ENST00000362776 107 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 RNU6-653P-201ENST00000363074 106 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 U3.8-201ENST00000363675 217 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 RNU6-1020P-201ENST00000363684 107 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 RNU1-112P-201ENST00000364401 164 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 Y_RNA.304-201ENST00000365011 112 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 MIR29B2-201ENST00000385055 81 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 RNU4-61P-201ENST00000411243 107 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 TOMM22P2-201ENST00000430735 237 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 Y_RNA.637-201ENST00000459424 114 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 RAC1P5-201ENST00000512182 576 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 RNU6-255P-201ENST00000516957 105 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 MIR4308-201ENST00000580634 81 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 AC008739.2-201ENST00000597006 317 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 AC006380.1-201ENST00000603598 186 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 AC072026.1-201ENST00000605023 201 ntBASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHAMP1Q96JM3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 CD24P4-201ENST00000382840 243 ntBASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 MIR586-201ENST00000385035 97 ntBASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 RNA5SP210-201ENST00000391034 120 ntBASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 MICF-203ENST00000432679 129 ntBASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 AL713866.2-201ENST00000603579 219 ntBASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 AL365265.1-201ENST00000621045 234 ntBASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHAMP1Q96JM3 RNU6-486P-201ENST00000363116 107 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 RNU6-944P-201ENST00000364023 107 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 RNU6-801P-201ENST00000364087 105 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 RNU6-923P-201ENST00000364753 107 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 Y_RNA.435-201ENST00000384095 112 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 AL031003.1-201ENST00000404229 172 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 RN7SKP51-201ENST00000410781 304 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 RPL39P40-201ENST00000445481 146 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 AL137100.2-201ENST00000555786 315 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHAMP1Q96JM3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 U8.2-201ENST00000363156 134 ntBASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 Y_RNA.233-201ENST00000364407 101 ntBASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 Y_RNA.308-201ENST00000365043 101 ntBASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 RNU6-1248P-201ENST00000391096 64 ntBASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 AL139132.1-201ENST00000431587 344 ntBASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 HMGN2P9-201ENST00000476875 229 ntBASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 U6.115-201ENST00000636045 103 ntBASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 AC080128.1-201ENST00000474389 1917 ntBASIC3.15□□□□□ -1.91
CHAMP1Q96JM3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 289.1 ms