Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MIR7157-201ENST00000635801 60 ntBASIC3.27□□□□□ -1.89
BRF1Q92994 RNU1-72P-201ENST00000362976 153 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 CD24P4-201ENST00000382840 243 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 Y_RNA.456-201ENST00000384232 111 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 SNORA26.5-201ENST00000391215 123 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 MIR1294-201ENST00000408503 142 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 U6atac.2-201ENST00000408644 118 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 SEM1P1-201ENST00000506694 209 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 AC100767.1-201ENST00000528178 123 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 MIR4506-201ENST00000584693 77 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 AC013791.1-201ENST00000616619 62 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.26□□□□□ -1.89
BRF1Q92994 AC103988.1-201ENST00000566382 2177 ntBASIC3.26□□□□□ -1.89
BRF1Q92994 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BRF1Q92994 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
BRF1Q92994 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BRF1Q92994 MIR26A1-201ENST00000362205 77 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 Y_RNA.238-201ENST00000364441 102 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 Y_RNA.287-201ENST00000364853 94 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 RNU4-17P-201ENST00000365598 141 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 SNORA72.4-201ENST00000384174 132 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 MIR1283-1-201ENST00000408494 87 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 SNORD88.1-201ENST00000408684 91 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 RAC1P5-201ENST00000512182 576 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 SNORA70.12-201ENST00000516084 153 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 SNORA9.3-201ENST00000516383 129 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.25□□□□□ -1.89
BRF1Q92994 AC018630.3-201ENST00000542637 96 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 MIR3605-201ENST00000583214 100 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 AC090517.3-201ENST00000625170 141 ntBASIC3.25□□□□□ -1.89
BRF1Q92994 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.24□□□□□ -1.89
BRF1Q92994 RNU6-312P-201ENST00000364629 107 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 Y_RNA.310-201ENST00000365063 113 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 RNU6-804P-201ENST00000384286 107 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 RNU6-1274P-201ENST00000384557 107 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 RN7SKP123-201ENST00000410732 291 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 Z82209.1-201ENST00000422141 2135 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
BRF1Q92994 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.24□□□□□ -1.89
BRF1Q92994 AC006483.1-201ENST00000487308 313 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF1Q92994 AC079600.2-201ENST00000550076 130 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 MIR6733-201ENST00000635723 61 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 AL159152.1-201ENST00000635019 2587 ntBASIC3.24□□□□□ -1.89
BRF1Q92994 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.24□□□□□ -1.89
BRF1Q92994 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.89
BRF1Q92994 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF1Q92994 MAPK10-266ENST00000641066 6555 ntBASIC3.23□□□□□ -1.89
BRF1Q92994 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRF1Q92994 Y_RNA.75-201ENST00000362927 97 ntBASIC3.23□□□□□ -1.89
BRF1Q92994 RNU1-112P-201ENST00000364401 164 ntBASIC3.23□□□□□ -1.89
BRF1Q92994 SNORA68.1-201ENST00000364537 132 ntBASIC3.23□□□□□ -1.89
BRF1Q92994 SNORD50.2-201ENST00000365465 70 ntBASIC3.23□□□□□ -1.89
BRF1Q92994 SNORA19-201ENST00000384737 128 ntBASIC3.23□□□□□ -1.89
BRF1Q92994 Y_RNA.580-201ENST00000391004 95 ntBASIC3.23□□□□□ -1.89
BRF1Q92994 AL355497.1-201ENST00000406262 551 ntBASIC3.23□□□□□ -1.89
BRF1Q92994 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.23□□□□□ -1.89
BRF1Q92994 AL713866.2-201ENST00000603579 219 ntBASIC3.23□□□□□ -1.89
BRF1Q92994 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
BRF1Q92994 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BRF1Q92994 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.22□□□□□ -1.89
BRF1Q92994 Y_RNA.23-201ENST00000362496 106 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 RNU6-899P-201ENST00000363947 107 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 RNU6-944P-201ENST00000364023 107 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 RNU6-234P-201ENST00000365229 104 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 Y_RNA.341-201ENST00000365341 102 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 MIR613-201ENST00000385248 95 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 AL139095.1-201ENST00000404326 391 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 RNU5E-9P-201ENST00000411164 104 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.22□□□□□ -1.89
BRF1Q92994 RNU7-14P-201ENST00000459331 62 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 RN7SL297P-201ENST00000483161 293 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 AC005840.1-201ENST00000498412 377 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.22□□□□□ -1.89
BRF1Q92994 SCARNA3-201ENST00000517097 143 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 MTND5P41-201ENST00000517498 206 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.22□□□□□ -1.89
BRF1Q92994 AC104465.1-201ENST00000611365 139 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.22□□□□□ -1.89
BRF1Q92994 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRF1Q92994 AC009487.4-201ENST00000624969 3585 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
BRF1Q92994 SNORD113-1-201ENST00000365321 69 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 RNU6-381P-201ENST00000391259 108 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 AL138827.1-201ENST00000402666 306 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 RNU6-855P-201ENST00000410395 104 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 RNU6-1328P-201ENST00000410938 106 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 RNA5SP344-201ENST00000411081 104 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.21□□□□□ -1.9
BRF1Q92994 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.21□□□□□ -1.9
BRF1Q92994 RPL30P4-201ENST00000429309 333 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 TMSB4XP3-201ENST00000445144 114 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 AC074290.1-201ENST00000448883 135 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 RNU7-57P-201ENST00000459540 60 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 AC080013.2-201ENST00000460866 323 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 AC114982.1-201ENST00000469402 321 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 RNU6-586P-201ENST00000517265 104 ntBASIC3.21□□□□□ -1.9
BRF1Q92994 AC109329.2-201ENST00000519658 482 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms