Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MFSD8-236ENST00000641509 4050 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 AC006504.1-201ENST00000562493 3666 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HPS1Q92902 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HPS1Q92902 RNU6-363P-201ENST00000362895 105 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 RNU1-72P-201ENST00000362976 153 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 Y_RNA.253-201ENST00000364562 112 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 RNU6-234P-201ENST00000365229 104 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 RNU6-733P-201ENST00000410759 104 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 Y_RNA.621-201ENST00000411065 96 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 AL732292.1-201ENST00000426692 226 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 AC011998.1-201ENST00000433403 117 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.85□□□□□ -1.79
HPS1Q92902 AC010099.1-201ENST00000455434 375 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 RN7SL810P-201ENST00000493031 276 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 RNU2-35P-201ENST00000516446 142 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 RNU2-34P-201ENST00000516534 121 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.85□□□□□ -1.79
HPS1Q92902 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.85□□□□□ -1.79
HPS1Q92902 AC013412.1-201ENST00000610687 192 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 AL359075.3-201ENST00000613288 217 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 AC087741.2-201ENST00000619415 172 ntBASIC3.85□□□□□ -1.79
HPS1Q92902 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HPS1Q92902 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.85□□□□□ -1.79
HPS1Q92902 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS1Q92902 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
HPS1Q92902 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS1Q92902 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HPS1Q92902 RNU6-661P-201ENST00000362409 107 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 RNU6-418P-201ENST00000384035 107 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 SNORA18-201ENST00000384416 132 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 AC017083.1-201ENST00000428093 483 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 AC099677.2-201ENST00000436385 175 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 ABCF2P2-201ENST00000450549 296 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 snoU13.28-201ENST00000459235 104 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 AC109327.1-201ENST00000471666 403 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 RPL36AP48-201ENST00000485521 314 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HPS1Q92902 MIR3618-201ENST00000580330 88 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 AC006160.2-201ENST00000637708 154 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS1Q92902 MAPK10-373ENST00000641983 6772 ntBASIC3.84□□□□□ -1.79
HPS1Q92902 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.84□□□□□ -1.79
HPS1Q92902 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HPS1Q92902 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.83□□□□□ -1.8
HPS1Q92902 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HPS1Q92902 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HPS1Q92902 USP8P1-201ENST00000494673 3183 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS1Q92902 AC021146.4-201ENST00000309229 279 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 RNA5SP307-201ENST00000362863 116 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 SNORD115-19-201ENST00000363098 82 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 SNORD115-18-201ENST00000363293 82 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 Y_RNA.155-201ENST00000363632 101 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 SNORD115-17-201ENST00000364612 82 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 RPL32P35-201ENST00000415214 394 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 RPL23AP93-201ENST00000440847 484 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 AL133162.1-201ENST00000463228 453 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS1Q92902 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS1Q92902 MIR4668-201ENST00000582284 70 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 AL160290.3-201ENST00000604869 165 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 AC007546.2-201ENST00000623996 360 ntBASIC3.83□□□□□ -1.8
HPS1Q92902 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS1Q92902 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HPS1Q92902 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HPS1Q92902 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HPS1Q92902 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HPS1Q92902 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.82□□□□□ -1.8
HPS1Q92902 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HPS1Q92902 SNORD45B-201ENST00000364617 72 ntBASIC3.82□□□□□ -1.8
HPS1Q92902 RNU6-652P-201ENST00000365488 107 ntBASIC3.82□□□□□ -1.8
HPS1Q92902 RNU6-409P-201ENST00000384114 104 ntBASIC3.82□□□□□ -1.8
HPS1Q92902 RN7SL303P-201ENST00000469773 251 ntBASIC3.82□□□□□ -1.8
HPS1Q92902 RNA5SP73-201ENST00000516744 108 ntBASIC3.82□□□□□ -1.8
HPS1Q92902 Y_RNA.705-201ENST00000516862 110 ntBASIC3.82□□□□□ -1.8
HPS1Q92902 AL110115.1-201ENST00000614396 364 ntBASIC3.82□□□□□ -1.8
HPS1Q92902 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.82□□□□□ -1.8
HPS1Q92902 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.82□□□□□ -1.8
HPS1Q92902 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.82□□□□□ -1.8
HPS1Q92902 Z82217.1-201ENST00000625157 8149 ntBASIC3.82□□□□□ -1.8
HPS1Q92902 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HPS1Q92902 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HPS1Q92902 CPHL1P-201ENST00000461341 3407 ntBASIC3.81□□□□□ -1.8
HPS1Q92902 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.81□□□□□ -1.8
HPS1Q92902 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.81□□□□□ -1.8
HPS1Q92902 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.81□□□□□ -1.8
HPS1Q92902 RNU6-887P-201ENST00000410660 100 ntBASIC3.81□□□□□ -1.8
HPS1Q92902 AC010401.1-201ENST00000463867 348 ntBASIC3.81□□□□□ -1.8
HPS1Q92902 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.81□□□□□ -1.8
HPS1Q92902 SCGB1D5P-201ENST00000515134 247 ntBASIC3.81□□□□□ -1.8
HPS1Q92902 Vault.1-201ENST00000516474 102 ntBASIC3.81□□□□□ -1.8
HPS1Q92902 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS1Q92902 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.81□□□□□ -1.8
HPS1Q92902 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.81□□□□□ -1.8
HPS1Q92902 uc_338.14-201ENST00000613162 166 ntBASIC3.81□□□□□ -1.8
HPS1Q92902 AC012442.3-202ENST00000636742 206 ntBASIC3.81□□□□□ -1.8
HPS1Q92902 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HPS1Q92902 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms