Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC107083.1-201ENST00000439643 279 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 RNU6-436P-201ENST00000516171 114 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 RNU6-155P-201ENST00000516347 100 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 RNU6-1098P-201ENST00000516772 96 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.02□□□□□ -1.93
ERCC4Q92889 CBX3P4-201ENST00000538909 354 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 MIR4635-201ENST00000583759 79 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ERCC4Q92889 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.01□□□□□ -1.93
ERCC4Q92889 MIR411-201ENST00000362239 96 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 Y_RNA.83-201ENST00000363005 113 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 Y_RNA.111-201ENST00000363248 100 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 RNU6-944P-201ENST00000364023 107 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 RNU6-461P-201ENST00000364195 107 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 Y_RNA.243-201ENST00000364481 109 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 Y_RNA.555-201ENST00000384673 110 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 AL135938.1-201ENST00000443141 297 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.01□□□□□ -1.93
ERCC4Q92889 SNORD116-28-201ENST00000516123 91 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 RNU1-117P-201ENST00000517041 158 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 SCARNA3-201ENST00000517097 143 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.01□□□□□ -1.93
ERCC4Q92889 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.01□□□□□ -1.93
ERCC4Q92889 MIR3616-201ENST00000584070 92 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 AC004792.1-201ENST00000614523 137 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.01□□□□□ -1.93
ERCC4Q92889 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ERCC4Q92889 AC006386.2-201ENST00000624491 75 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 AC012005.1-201ENST00000624575 75 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 AL137790.1-201ENST00000634283 177 ntBASIC3.01□□□□□ -1.93
ERCC4Q92889 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
ERCC4Q92889 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ERCC4Q92889 RNU4-80P-201ENST00000363200 141 ntBASIC3□□□□□ -1.93
ERCC4Q92889 Y_RNA.199-201ENST00000364014 102 ntBASIC3□□□□□ -1.93
ERCC4Q92889 SNORD115-30-201ENST00000364117 82 ntBASIC3□□□□□ -1.93
ERCC4Q92889 Y_RNA.292-201ENST00000364904 97 ntBASIC3□□□□□ -1.93
ERCC4Q92889 RNU6-1289P-201ENST00000384431 106 ntBASIC3□□□□□ -1.93
ERCC4Q92889 RNU4-70P-201ENST00000384579 139 ntBASIC3□□□□□ -1.93
ERCC4Q92889 MIR548B-201ENST00000385247 97 ntBASIC3□□□□□ -1.93
ERCC4Q92889 AL138827.1-201ENST00000402666 306 ntBASIC3□□□□□ -1.93
ERCC4Q92889 U3.40-201ENST00000408706 208 ntBASIC3□□□□□ -1.93
ERCC4Q92889 RNU2-61P-201ENST00000411069 191 ntBASIC3□□□□□ -1.93
ERCC4Q92889 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3□□□□□ -1.93
ERCC4Q92889 AL138752.1-201ENST00000452964 351 ntBASIC3□□□□□ -1.93
ERCC4Q92889 AC140059.1-201ENST00000489238 361 ntBASIC3□□□□□ -1.93
ERCC4Q92889 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
ERCC4Q92889 RNA5SP367-201ENST00000516557 118 ntBASIC3□□□□□ -1.93
ERCC4Q92889 RN7SKP40-201ENST00000517211 242 ntBASIC3□□□□□ -1.93
ERCC4Q92889 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3□□□□□ -1.93
ERCC4Q92889 MIR3145-201ENST00000580727 82 ntBASIC3□□□□□ -1.93
ERCC4Q92889 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3□□□□□ -1.93
ERCC4Q92889 AC005828.6-201ENST00000606610 232 ntBASIC3□□□□□ -1.93
ERCC4Q92889 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
ERCC4Q92889 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3□□□□□ -1.93
ERCC4Q92889 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3□□□□□ -1.93
ERCC4Q92889 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ERCC4Q92889 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.99□□□□□ -1.93
ERCC4Q92889 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
ERCC4Q92889 MIR95-201ENST00000385072 81 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 Y_RNA.626-201ENST00000411288 95 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 PIGPP3-201ENST00000425307 415 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 AC092427.1-202ENST00000430569 476 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.99□□□□□ -1.93
ERCC4Q92889 Y_RNA.644-201ENST00000459006 113 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 AC080013.2-201ENST00000460866 323 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 HMGN2P9-201ENST00000476875 229 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 Y_RNA.674-201ENST00000516362 113 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 AC105245.1-201ENST00000581934 244 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 DEFB117-201ENST00000602356 141 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 AC090517.3-201ENST00000625170 141 ntBASIC2.99□□□□□ -1.93
ERCC4Q92889 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.99□□□□□ -1.93
ERCC4Q92889 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
ERCC4Q92889 Z82209.1-201ENST00000422141 2135 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 SNORA80A-201ENST00000363922 136 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 DEFA7P-201ENST00000382676 285 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 MIR1294-201ENST00000408503 142 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 Y_RNA.590-201ENST00000410140 107 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 PRELID3BP1-201ENST00000457142 540 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 Y_RNA.638-201ENST00000459374 113 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 AP001486.1-201ENST00000463339 476 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 RNU6-107P-201ENST00000516643 102 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 AL512605.2-201ENST00000592972 256 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 AC006380.1-201ENST00000603598 186 ntBASIC2.98□□□□□ -1.93
ERCC4Q92889 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.98□□□□□ -1.93
ERCC4Q92889 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.98□□□□□ -1.93
ERCC4Q92889 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.97□□□□□ -1.93
ERCC4Q92889 SNORA25.6-201ENST00000364121 118 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 Y_RNA.329-201ENST00000365209 107 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 RNU6-662P-201ENST00000384253 104 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 AL049873.1-201ENST00000480540 376 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.97□□□□□ -1.93
ERCC4Q92889 RNU6-586P-201ENST00000517265 104 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 AC090616.3-201ENST00000582184 217 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 MIR3117-201ENST00000584034 78 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 Z83818.1-201ENST00000603584 150 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.97□□□□□ -1.93
ERCC4Q92889 MIR7106-201ENST00000612419 65 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 AC073349.3-201ENST00000617616 186 ntBASIC2.97□□□□□ -1.93
ERCC4Q92889 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
ERCC4Q92889 AC080128.1-201ENST00000474389 1917 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms