Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 MIR1283-1-201ENST00000408494 87 ntBASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 RNU2-48P-201ENST00000410694 191 ntBASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 RNU2-32P-201ENST00000411193 191 ntBASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 AC025750.2-201ENST00000442609 450 ntBASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 RNU6-155P-201ENST00000516347 100 ntBASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 MIR3117-201ENST00000584034 78 ntBASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 AC078938.1-201ENST00000620993 318 ntBASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CCHCR1Q8TD31 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 SNORA80A-201ENST00000363922 136 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 Y_RNA.418-201ENST00000384029 102 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 RNU6-1026P-201ENST00000384465 108 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 RNU2-63P-201ENST00000410792 194 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 POLR2KP2-201ENST00000438155 177 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 RPS12P2-201ENST00000439728 269 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 AC016925.1-201ENST00000458303 298 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 RNU6-111P-201ENST00000517179 105 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 RNU1-104P-201ENST00000517280 175 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 MIR3668-201ENST00000582138 75 ntBASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCHCR1Q8TD31 RNU6-1266P-201ENST00000362794 105 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 MIR9-1-201ENST00000385198 89 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 MIR1185-2-201ENST00000408687 86 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 MRPS10P1-201ENST00000448483 130 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 CKS1BP2-201ENST00000497342 240 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 RNU6-965P-201ENST00000516721 96 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 GTF3AP2-201ENST00000557014 266 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 AC006380.1-201ENST00000603598 186 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 AC037487.3-201ENST00000606668 112 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 BX284668.6-201ENST00000606899 438 ntBASIC2.73□□□□□ -1.97
CCHCR1Q8TD31 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 UBE2WP1-201ENST00000362030 340 ntBASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 Y_RNA.243-201ENST00000364481 109 ntBASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 RNU6-975P-201ENST00000384296 105 ntBASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 MTCO1P5-201ENST00000433573 344 ntBASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 AL445687.1-201ENST00000439946 251 ntBASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 MIR4753-201ENST00000585119 83 ntBASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 AL355297.2-201ENST00000604792 129 ntBASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 AC009487.4-201ENST00000624969 3585 ntBASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
CCHCR1Q8TD31 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
CCHCR1Q8TD31 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.44-201ENST00000362676 108 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 SNORA5B-201ENST00000363786 132 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 SNORD27-201ENST00000363981 72 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 SNORD115-30-201ENST00000364117 82 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 RNY1-201ENST00000364228 113 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 SNORA67.1-201ENST00000364749 141 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.361-201ENST00000365515 120 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 MIR561-201ENST00000385216 97 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 HMGN2P18-201ENST00000450680 270 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 RNU6-436P-201ENST00000516171 114 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 MIR4643-201ENST00000577473 78 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCHCR1Q8TD31 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 SNORA25.1-201ENST00000362326 128 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 RNU1-112P-201ENST00000364401 164 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 Y_RNA.277-201ENST00000364754 102 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 RNA5SP125-201ENST00000364843 120 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 RNU6-338P-201ENST00000383888 105 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 SNORA80E-201ENST00000384744 137 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 RNA5SP210-201ENST00000391034 120 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 U3.40-201ENST00000408706 208 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 AC007064.1-201ENST00000412238 351 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 RNU7-57P-201ENST00000459540 60 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 AC114982.1-201ENST00000469402 321 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 AC018868.1-201ENST00000491307 315 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 AC005828.6-201ENST00000606610 232 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 AL137847.3-201ENST00000611521 109 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 U6.115-201ENST00000636045 103 ntBASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCHCR1Q8TD31 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CCHCR1Q8TD31 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms