Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RPL36AP21-201ENST00000490372 323 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 RPL23AP54-201ENST00000495129 419 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-1299P-201ENST00000516316 100 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 RNU7-116P-201ENST00000516940 62 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 AC018630.3-201ENST00000542637 96 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 MTND5P18-201ENST00000445624 1801 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 AC000403.1-201ENST00000613696 3585 ntBASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHKBP1Q8TBC3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 RNU4-41P-201ENST00000364426 143 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 Y_RNA.281-201ENST00000364774 94 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 SNORA26.2-201ENST00000390922 122 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 MIR1185-2-201ENST00000408687 86 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 RPS3P1-201ENST00000456781 192 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 AC107626.1-201ENST00000471084 183 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 AC078918.1-201ENST00000498515 228 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 AC091152.3-201ENST00000604227 325 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 RNU6-91P-201ENST00000607774 107 ntBASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHKBP1Q8TBC3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SHKBP1Q8TBC3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SHKBP1Q8TBC3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 SNORA72-201ENST00000384339 132 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 MIR586-201ENST00000385035 97 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 SNORA59A-201ENST00000459326 152 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 RPL23AP62-201ENST00000463396 453 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 AC006445.2-201ENST00000510061 472 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-412P-201ENST00000516434 106 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 RNA5SP153-201ENST00000516498 76 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 HMGN2P15-201ENST00000585707 270 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 AL049861.1-201ENST00000603130 150 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 AC097639.2-201ENST00000603159 172 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 AC005972.2-201ENST00000604690 348 ntBASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.46□□□□□ -1.86
SHKBP1Q8TBC3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 AC058791.1-201ENST00000608412 3198 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 AC007256.1-201ENST00000392253 2765 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-748P-201ENST00000384648 107 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 SNORD72-201ENST00000390994 80 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 RNU4-47P-201ENST00000410876 114 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 AL135786.1-201ENST00000415892 214 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 VDAC1P3-201ENST00000434069 851 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 SNRPGP5-201ENST00000456003 220 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 AP001486.1-201ENST00000463339 476 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 AC006445.1-201ENST00000491925 405 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 AC078817.1-201ENST00000492623 435 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 SNORA70.19-201ENST00000516717 90 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 MIR5047-201ENST00000579212 100 ntBASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.45□□□□□ -1.86
SHKBP1Q8TBC3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-766P-201ENST00000362478 107 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 SNORA27.1-201ENST00000362604 124 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 RNU6-1107P-201ENST00000364817 104 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 MIR607-201ENST00000385241 96 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 AC023141.4-201ENST00000412031 328 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 S100A11P2-201ENST00000467589 312 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 RPL27AP5-201ENST00000469428 449 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 RPS26P55-201ENST00000471178 356 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 AL049873.1-201ENST00000480540 376 ntBASIC3.44□□□□□ -1.86
SHKBP1Q8TBC3 RNA5SP341-201ENST00000516261 117 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms