Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RRN3P3-201ENST00000549207 578 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 AC113195.1-201ENST00000579952 141 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 RPS29P30-201ENST00000600975 111 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 AL121655.1-201ENST00000605811 308 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 AL357075.2-201ENST00000614906 189 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.35□□□□□ -2.03
VPS52Q8N1B4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS52Q8N1B4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
VPS52Q8N1B4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS52Q8N1B4 SNORA3A-201ENST00000364113 130 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.380-201ENST00000365663 111 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.389-201ENST00000383924 113 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.458-201ENST00000384240 102 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 SNORA51.11-201ENST00000384442 131 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.527-201ENST00000384573 102 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.551-201ENST00000384661 102 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 MIR1283-1-201ENST00000408494 87 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 MIR1252-201ENST00000408861 65 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 RNU6-101P-201ENST00000410323 104 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 SRIP3-201ENST00000413200 219 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS52Q8N1B4 FCF1P4-201ENST00000448326 183 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 PCNPP5-201ENST00000452246 481 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 NDUFB4P10-201ENST00000452541 359 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 HMGN2P9-201ENST00000476875 229 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.34□□□□□ -2.03
VPS52Q8N1B4 AC067942.3-201ENST00000512025 362 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 RNU6-764P-201ENST00000516396 105 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.715-201ENST00000517082 110 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 RNA5SP490-201ENST00000517141 136 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 AK6P2-201ENST00000549020 471 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 AC233702.2-202ENST00000562547 291 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 AL390123.1-201ENST00000603216 237 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 AC124312.5-201ENST00000604451 268 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 AL360085.1-201ENST00000604713 532 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.34□□□□□ -2.03
VPS52Q8N1B4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS52Q8N1B4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
VPS52Q8N1B4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VPS52Q8N1B4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.145-201ENST00000363527 102 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.415-201ENST00000384012 112 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 AL033519.2-201ENST00000403958 392 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 ELOCP21-201ENST00000412558 336 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 AC113618.1-201ENST00000416747 285 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VPS52Q8N1B4 RPEP5-201ENST00000441137 268 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 SNORA40.9-201ENST00000515895 93 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS52Q8N1B4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS52Q8N1B4 AL021879.1-201ENST00000611756 288 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 AC240442.1-201ENST00000616055 283 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
VPS52Q8N1B4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS52Q8N1B4 AC008555.8-201ENST00000623602 2168 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VPS52Q8N1B4 AL356292.1-201ENST00000283110 373 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 MIR410-201ENST00000362222 80 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 RNU6-545P-201ENST00000362681 104 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 RNU6-727P-201ENST00000363592 107 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 U3.8-201ENST00000363675 217 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.162-201ENST00000363683 102 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 RNU6-450P-201ENST00000364654 107 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 RNU6-1026P-201ENST00000384465 108 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 AL137159.1-201ENST00000452808 512 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 RPL23AP42-201ENST00000471152 471 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 AC087441.2-201ENST00000529141 262 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 MIR4659A-201ENST00000580269 81 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 AL355297.3-201ENST00000604082 446 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 PART1_1.1-201ENST00000611761 217 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 AC009831.4-201ENST00000620744 325 ntBASIC2.32□□□□□ -2.04
VPS52Q8N1B4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.153-201ENST00000363615 91 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 RNU6-743P-201ENST00000364151 106 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 AC123900.1-201ENST00000420390 96 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 HMGN2P38-201ENST00000423806 265 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 AC073910.1-201ENST00000445047 438 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 UQCRBP2-201ENST00000447827 297 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 AL118496.2-201ENST00000448300 230 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 U8.20-201ENST00000459445 131 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 AC104435.1-201ENST00000483483 166 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 RNU1-117P-201ENST00000517041 158 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.720-201ENST00000517166 92 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS52Q8N1B4 AC091932.3-201ENST00000624223 323 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.31□□□□□ -2.04
VPS52Q8N1B4 AC009487.4-201ENST00000624969 3585 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
VPS52Q8N1B4 AC092881.1-201ENST00000638218 2733 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS52Q8N1B4 MIR340-201ENST00000362125 95 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.276-201ENST00000364732 109 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 SNORD87-201ENST00000364849 89 ntBASIC2.3□□□□□ -2.04
VPS52Q8N1B4 Y_RNA.471-201ENST00000384312 102 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms