Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR3186-201ENST00000577404 85 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 SNORD115-40-201ENST00000606510 82 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 MIR2052-201ENST00000636055 55 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 MIR376A2-201ENST00000636782 80 ntBASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC116Q8IYX3 FAM35DP-201ENST00000323387 2712 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 MIR23B-201ENST00000384832 97 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 SNORA48.7-201ENST00000391302 135 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 MIR1193-201ENST00000408109 78 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 RN7SL271P-201ENST00000487601 295 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 RNU6-830P-201ENST00000516353 107 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 Y_RNA.685-201ENST00000516532 108 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 RN7SKP282-201ENST00000516824 299 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 AC141557.1-201ENST00000540982 400 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 MIR5197-201ENST00000583721 112 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 AC008507.4-201ENST00000585464 127 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 MIR6716-201ENST00000613413 80 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 MALAT1.1-201ENST00000618249 95 ntBASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC116Q8IYX3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 Y_RNA.78-201ENST00000362970 110 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 Y_RNA.253-201ENST00000364562 112 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 MIR759-201ENST00000390224 91 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 MIR767-201ENST00000390228 109 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 MIR1251-201ENST00000408552 70 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 SNRPGP13-201ENST00000442212 177 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 AC025750.2-201ENST00000442609 450 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 MIR4474-201ENST00000579189 78 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 AL353746.1-201ENST00000566293 6881 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 MFSD8-236ENST00000641509 4050 ntBASIC3.78□□□□□ -1.8
CCDC116Q8IYX3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 RNA5SP130-201ENST00000364431 114 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 RNA5SP479-201ENST00000364858 117 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 HMGN2P18-201ENST00000450680 270 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 MRPS36P2-201ENST00000512569 299 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 RNU6-1146P-201ENST00000516282 102 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 RNU6-965P-201ENST00000516721 96 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 RNU6-586P-201ENST00000517265 104 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 AC073413.2-201ENST00000604332 360 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 SNORA51-201ENST00000606420 132 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 MIR6868-201ENST00000611215 58 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
CCDC116Q8IYX3 AL049781.1-201ENST00000623195 3585 ntBASIC3.76□□□□□ -1.81
CCDC116Q8IYX3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC116Q8IYX3 MIR518F-201ENST00000384973 87 ntBASIC3.76□□□□□ -1.81
CCDC116Q8IYX3 RPS26P8-201ENST00000393490 348 ntBASIC3.76□□□□□ -1.81
CCDC116Q8IYX3 MIR1253-201ENST00000408273 105 ntBASIC3.76□□□□□ -1.81
CCDC116Q8IYX3 RNU6-904P-201ENST00000516206 101 ntBASIC3.76□□□□□ -1.81
CCDC116Q8IYX3 AL591424.2-201ENST00000617023 128 ntBASIC3.76□□□□□ -1.81
CCDC116Q8IYX3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC116Q8IYX3 MIR1248-201ENST00000629190 106 ntBASIC3.76□□□□□ -1.81
CCDC116Q8IYX3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 RNU6-486P-201ENST00000363116 107 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 RNU6-690P-201ENST00000365242 106 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 RNU6-1152P-201ENST00000384576 107 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 MT-TI-201ENST00000387365 69 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 RPL21P65-201ENST00000406094 466 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 RN7SKP156-201ENST00000410308 342 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 RHEBP3-201ENST00000411920 351 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 AC004975.1-201ENST00000428733 208 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 AC233266.1-201ENST00000454518 96 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 RN7SKP21-201ENST00000516503 220 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 RNA5SP490-201ENST00000517141 136 ntBASIC3.75□□□□□ -1.81
CCDC116Q8IYX3 AC084364.2-201ENST00000546924 395 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 344.2 ms