Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MIR338-201ENST00000636369 67 ntBASIC1.42□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-661P-201ENST00000362409 107 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 U3.8-201ENST00000363675 217 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 Y_RNA.364-201ENST00000365532 101 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-281P-201ENST00000384212 103 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 MIR548B-201ENST00000385247 97 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-370P-201ENST00000411008 104 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 AC007098.1-201ENST00000420122 367 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 RNU7-87P-201ENST00000459343 62 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-221P-201ENST00000459541 99 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-237P-201ENST00000515985 71 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 AC093023.1-201ENST00000547375 507 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 RBM11P1-201ENST00000604951 799 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 AC103810.8-201ENST00000607347 118 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 AC092794.2-201ENST00000620933 563 ntBASIC1.41□□□□□ -2.18
C9orf40Q8IXQ3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 RNU1-42P-201ENST00000364033 160 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-296P-201ENST00000384608 107 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 MIR1253-201ENST00000408273 105 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC108667.1-201ENST00000428618 249 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC092423.1-201ENST00000430165 186 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 HMGN2P34-201ENST00000437647 269 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 NDUFB4P10-201ENST00000452541 359 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 RNU1-98P-201ENST00000458992 160 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 RPL17P19-201ENST00000489069 552 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC025647.1-201ENST00000517879 253 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AK6P2-201ENST00000549020 471 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC015720.1-201ENST00000565251 277 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC004584.2-201ENST00000570407 410 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC090617.3-201ENST00000573670 475 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 AC005730.3-201ENST00000583067 366 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 MTND5P35-201ENST00000557537 1720 ntBASIC1.4□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-874P-201ENST00000362390 105 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 RNA5SP432-201ENST00000362480 116 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 RNU4-13P-201ENST00000364019 141 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 MIR1185-2-201ENST00000408687 86 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 AC016909.1-201ENST00000415916 166 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 AC008134.1-201ENST00000420943 193 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 CST2P1-201ENST00000425770 87 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 EIF1P2-201ENST00000428233 350 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 AC245047.4-201ENST00000433189 144 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.683-201ENST00000516508 93 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 MIR5690-201ENST00000583739 73 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 UBE2V2P2-201ENST00000587677 504 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 AC113139.1-201ENST00000605049 239 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 AC010615.1-201ENST00000594254 1764 ntBASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
C9orf40Q8IXQ3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 SNORA72.1-201ENST00000363485 129 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.142-201ENST00000363491 102 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-1188P-201ENST00000363795 107 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.474-201ENST00000384341 102 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-417P-201ENST00000384712 107 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 MIR520A-201ENST00000384862 85 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 RNU4-62P-201ENST00000410125 130 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 RNU2-7P-201ENST00000410794 178 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.646-201ENST00000410980 101 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-1001P-201ENST00000411265 100 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-1304P-201ENST00000411374 106 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-559P-201ENST00000516151 98 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-970P-201ENST00000516312 107 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 AC084364.2-201ENST00000546924 395 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 MIR4801-201ENST00000582704 82 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 AP000942.3-201ENST00000603702 160 ntBASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.38□□□□□ -2.19
C9orf40Q8IXQ3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-99P-201ENST00000364721 107 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-439P-201ENST00000384188 106 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 RNU6-310P-201ENST00000384655 107 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 Y_RNA.557-201ENST00000384680 107 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 MIR320A-201ENST00000385302 82 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 EBAG9P1-201ENST00000418955 543 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
C9orf40Q8IXQ3 UBE2V1P7-201ENST00000446395 340 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 448.3 ms