Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 U1.39-201ENST00000621562 146 ntBASIC2.98□□□□□ -1.93
TRIM48Q8IWZ4 AC093831.2-201ENST00000624393 3427 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.24-201ENST00000362508 103 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 Y_RNA.361-201ENST00000365515 120 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 RNU6-418P-201ENST00000384035 107 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 SNORA20B-201ENST00000384220 132 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 MIR300-201ENST00000401138 83 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 RNU6-57P-201ENST00000411348 103 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 AC244505.4-201ENST00000434905 287 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 SSXP5-201ENST00000443473 287 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 RN7SL75P-201ENST00000461926 281 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 S100A11P2-201ENST00000467589 312 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 MIR1248-201ENST00000629190 106 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 MAPK10-362ENST00000641864 4484 ntBASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM48Q8IWZ4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 RNU6-743P-201ENST00000364151 106 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 snoU2_19.4-201ENST00000364329 80 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 Y_RNA.441-201ENST00000384123 112 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 Y_RNA.456-201ENST00000384232 111 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 RNU6-381P-201ENST00000391259 108 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 RN7SKP220-201ENST00000410611 288 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 AL121890.1-201ENST00000435457 205 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 SEPT7P4-201ENST00000437076 306 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 RPS29P12-201ENST00000460178 152 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 SCARNA3-201ENST00000517097 143 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 SCARNA20.6-201ENST00000517251 106 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM48Q8IWZ4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 RNU6-899P-201ENST00000363947 107 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 Y_RNA.272-201ENST00000364696 102 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 SNORD116-18-201ENST00000383961 92 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 COTL1P1-201ENST00000422309 375 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 AL606753.1-201ENST00000427435 87 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 HSPE1P21-201ENST00000438283 308 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 SNORD65B-201ENST00000459126 73 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 RPS27AP9-201ENST00000477681 438 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 SNORA70.12-201ENST00000516084 153 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 AC105245.1-201ENST00000581934 244 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 AC093732.2-201ENST00000607950 274 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 AC069294.1-201ENST00000608397 350 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 snoZ196.1-201ENST00000625269 89 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 AC080128.1-201ENST00000474389 1917 ntBASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM48Q8IWZ4 SNORD31B-201ENST00000364977 69 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 SNORA54-201ENST00000384281 123 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 RNU6-975P-201ENST00000384296 105 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 MIR626-201ENST00000385032 94 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 RN7SKP123-201ENST00000410732 291 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 AC117454.1-201ENST00000491120 168 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 SCARNA8-201ENST00000515924 131 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 RNU6-1337P-201ENST00000516525 95 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 RNU6-453P-201ENST00000516819 85 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 AC107016.2-201ENST00000547968 190 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 AC013412.1-201ENST00000610687 192 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 AC108706.1-201ENST00000611053 297 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 AC006386.2-201ENST00000624491 75 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 AC012005.1-201ENST00000624575 75 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 AL137790.1-201ENST00000634283 177 ntBASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM48Q8IWZ4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM48Q8IWZ4 Y_RNA.121-201ENST00000363309 113 ntBASIC2.93□□□□□ -1.94
TRIM48Q8IWZ4 RNU6-1205P-201ENST00000363625 106 ntBASIC2.93□□□□□ -1.94
TRIM48Q8IWZ4 U8.7-201ENST00000364940 136 ntBASIC2.93□□□□□ -1.94
TRIM48Q8IWZ4 RNU6-407P-201ENST00000365280 104 ntBASIC2.93□□□□□ -1.94
TRIM48Q8IWZ4 RNU6-438P-201ENST00000365561 103 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms