Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC009237.7-201ENST00000447357 229 ntBASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 AL118496.2-201ENST00000448300 230 ntBASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 TRMT112P2-201ENST00000512910 132 ntBASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 DEFB131C-201ENST00000528817 165 ntBASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 AC125232.2-201ENST00000592457 143 ntBASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 MIR8081-201ENST00000611533 95 ntBASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 AC135776.4-201ENST00000624300 1904 ntBASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
KRT28Q7Z3Y7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 Y_RNA.162-201ENST00000363683 102 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 RNU6-450P-201ENST00000364654 107 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 RNU6-438P-201ENST00000365561 103 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 RNU6-926P-201ENST00000384075 107 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 RNU6-318P-201ENST00000384283 103 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 MIR9-3-201ENST00000385084 90 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 RNU6-985P-201ENST00000410182 104 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 RNU1-117P-201ENST00000517041 158 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 AL360085.1-201ENST00000604713 532 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 AL359821.1-201ENST00000605519 182 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 AC084768.2-201ENST00000622736 221 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 MTND5P35-201ENST00000557537 1720 ntBASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.61□□□□□ -1.99
KRT28Q7Z3Y7 RNU4-50P-201ENST00000364361 141 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 MIR329-1-201ENST00000385028 80 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 RNA5SP181-201ENST00000410246 98 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 SNORD12B-201ENST00000410433 91 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 AC091179.3-201ENST00000474761 144 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 AC022616.4-201ENST00000522985 181 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 AL390123.1-201ENST00000603216 237 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 AC005034.5-201ENST00000604219 466 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 MZT1P2-201ENST00000604387 248 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 SNORD11B-201ENST00000607707 90 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 U4atac.1-201ENST00000618345 95 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 MIR1248-201ENST00000629190 106 ntBASIC2.6□□□□□ -1.99
KRT28Q7Z3Y7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 RNU1-76P-201ENST00000362903 159 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 Y_RNA.145-201ENST00000363527 102 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 SNORA25B-201ENST00000365507 128 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 MIR144-201ENST00000384886 86 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 RNU6-823P-201ENST00000391042 103 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 SNORD78.2-201ENST00000391076 69 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 AL357139.1-201ENST00000407792 426 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 RNU2-20P-201ENST00000410425 191 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 RNU6-344P-201ENST00000516635 111 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 RN7SKP49-201ENST00000516675 260 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 RNA5SP490-201ENST00000517141 136 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 RNU6-667P-201ENST00000517186 102 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 CYCSP23-201ENST00000519781 313 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 RRN3P3-201ENST00000549207 578 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.59□□□□□ -1.99
KRT28Q7Z3Y7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
KRT28Q7Z3Y7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
KRT28Q7Z3Y7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.455-201ENST00000384230 98 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 RNU6-1145P-201ENST00000384246 107 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 AC004866.1-201ENST00000411748 78 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 MTND2P23-201ENST00000422990 651 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 UQCRBP2-201ENST00000447827 297 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.58□□□□□ -2
KRT28Q7Z3Y7 PCNPP5-201ENST00000452246 481 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 AC104435.1-201ENST00000483483 166 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 RNU6-327P-201ENST00000516270 127 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 RNU6-764P-201ENST00000516396 105 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 RNU6-250P-201ENST00000516958 103 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 MYL12BP1-201ENST00000569826 507 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.58□□□□□ -2
KRT28Q7Z3Y7 AC113195.1-201ENST00000579952 141 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 PART1_1.1-201ENST00000611761 217 ntBASIC2.58□□□□□ -2
KRT28Q7Z3Y7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRT28Q7Z3Y7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.57□□□□□ -2
KRT28Q7Z3Y7 RNU6-545P-201ENST00000362681 104 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 SNORA67.1-201ENST00000364749 141 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 RNU6-611P-201ENST00000384276 104 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 Y_RNA.471-201ENST00000384312 102 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 RNU2-48P-201ENST00000410694 191 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 AC113618.1-201ENST00000416747 285 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
KRT28Q7Z3Y7 FCF1P4-201ENST00000448326 183 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 HMGN2P18-201ENST00000450680 270 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 AC007395.1-201ENST00000451333 677 ntBASIC2.57□□□□□ -2
KRT28Q7Z3Y7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms