Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC096644.2-201ENST00000429278 159 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 RPL26P26-201ENST00000480251 434 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 AL442663.2-201ENST00000554385 511 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 MIR3126-201ENST00000577443 74 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 AL162373.1-201ENST00000620433 407 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SYNE3Q6ZMZ3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.158-201ENST00000363651 101 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.202-201ENST00000364083 110 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.216-201ENST00000364205 93 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 RNA5SP138-201ENST00000365098 114 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 SNORA33.2-201ENST00000365413 134 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.526-201ENST00000384572 110 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 HMGN2P39-201ENST00000398005 273 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 AL079342.1-201ENST00000401460 267 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 MRPL42P3-201ENST00000401492 326 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 ELOCP21-201ENST00000412558 336 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 AC245102.2-201ENST00000448956 180 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-498P-201ENST00000459468 107 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 AC114982.1-201ENST00000469402 321 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-856P-201ENST00000516959 98 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 MIR4753-201ENST00000585119 83 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 AC022202.1-201ENST00000613515 211 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 AC091932.3-201ENST00000624223 323 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 U6.92-201ENST00000636464 89 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.32□□□□□ -2.04
SYNE3Q6ZMZ3 SNORA40.19-201ENST00000390846 128 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 SNORD78.2-201ENST00000391076 69 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 AL033519.2-201ENST00000403958 392 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 SNORD12B-201ENST00000410433 91 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 FCF1P4-201ENST00000448326 183 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 PCNPP5-201ENST00000452246 481 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 AC010469.2-201ENST00000496412 480 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 SNORA31.25-201ENST00000517242 134 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 MIR5089-201ENST00000580047 84 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 AL031274.2-201ENST00000599419 203 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 AL078596.1-201ENST00000624856 447 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.31□□□□□ -2.04
SYNE3Q6ZMZ3 LINC02555-201ENST00000563933 1951 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-438P-201ENST00000365561 103 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-708P-201ENST00000384217 107 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 RNA5SP338-201ENST00000410495 85 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 TOMM22P2-201ENST00000430735 237 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 SNORA40.9-201ENST00000515895 93 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 AC022616.4-201ENST00000522985 181 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 AP003072.1-201ENST00000531740 145 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 AC078899.2-201ENST00000595282 212 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 AC091812.1-201ENST00000432235 1948 ntBASIC2.3□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-727P-201ENST00000363592 107 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 SNORD87-201ENST00000364849 89 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.485-201ENST00000384395 102 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-160P-201ENST00000384591 107 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 AC019129.1-201ENST00000403786 261 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 AL353689.1-201ENST00000438895 199 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 UQCRBP2-201ENST00000447827 297 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 RNU7-193P-201ENST00000516723 65 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 RNU1-117P-201ENST00000517041 158 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 MIR3169-201ENST00000578032 83 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 MIR4680-201ENST00000580906 66 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 AC022432.1-201ENST00000595739 310 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 AC104695.3-201ENST00000604052 296 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 AL121655.1-201ENST00000605811 308 ntBASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.29□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 SNORA63.7-201ENST00000365579 123 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 MIR548B-201ENST00000385247 97 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 MIR1283-2-201ENST00000408621 87 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 RNU2-2P-201ENST00000410396 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 AC074290.1-201ENST00000448883 135 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-221P-201ENST00000459541 99 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 RNU6-948P-201ENST00000516374 107 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.721-201ENST00000517207 102 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 AC040926.1-201ENST00000530195 238 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 AC018448.1-201ENST00000552843 316 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 AC008749.1-201ENST00000597650 306 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 AC016925.2-201ENST00000605108 242 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.812-201ENST00000610788 101 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms