Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA2Q6UWI4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA2Q6UWI4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA2Q6UWI4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.31□□□□□ -1.88
SHISA2Q6UWI4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 AC093908.1-201ENST00000623125 8092 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 MIR423-201ENST00000362201 94 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 RNU6-349P-201ENST00000362402 107 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 RNU6-486P-201ENST00000363116 107 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 MIR548D2-201ENST00000384955 97 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 MIR518F-201ENST00000384973 87 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 SNORA57.3-201ENST00000411095 141 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 SNRPGP13-201ENST00000442212 177 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 RNU6-1096P-201ENST00000517089 102 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 SNORA70.24-201ENST00000517233 118 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 AC068657.1-201ENST00000520807 306 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 AC013412.1-201ENST00000610687 192 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 AC002076.2-201ENST00000617362 122 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 MIR6500-201ENST00000622700 86 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 MIR3202-2-201ENST00000635980 79 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 AC006504.1-201ENST00000562493 3666 ntBASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.3□□□□□ -1.88
SHISA2Q6UWI4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 RNU6-1124P-201ENST00000384169 107 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 SNORA9-201ENST00000384215 133 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 MIR491-201ENST00000384877 84 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 MIR34B-201ENST00000385076 84 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 DBIP2-201ENST00000419076 262 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 RNA5SP246-201ENST00000458909 119 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 AC090517.3-201ENST00000625170 141 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 AL162726.3-218ENST00000636401 95 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 MAPK10-253ENST00000641010 4072 ntBASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SHISA2Q6UWI4 AL672167.1-203ENST00000641299 2975 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 Y_RNA.17-201ENST00000362433 111 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 RNU6-944P-201ENST00000364023 107 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 Y_RNA.298-201ENST00000364960 107 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 RNA5SP225-201ENST00000410874 135 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 SNRPGP10-201ENST00000432323 225 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 RPL35AP15-201ENST00000468042 339 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 RNU6-65P-201ENST00000516332 98 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 RN7SKP209-201ENST00000516888 304 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 MIR4474-201ENST00000579189 78 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 AC087685.1-201ENST00000587507 141 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
SHISA2Q6UWI4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
SHISA2Q6UWI4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SHISA2Q6UWI4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
SHISA2Q6UWI4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 Y_RNA.253-201ENST00000364562 112 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 Y_RNA.265-201ENST00000364677 108 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 RNU6-690P-201ENST00000365242 106 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 Y_RNA.410-201ENST00000383992 113 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 MIR634-201ENST00000385208 97 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 RN7SKP156-201ENST00000410308 342 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 HMGN2P31-201ENST00000432430 273 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 AL133162.1-201ENST00000463228 453 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 AC110768.1-201ENST00000509222 400 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 RAC1P2-201ENST00000511164 579 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 SNORA74D-201ENST00000516404 141 ntBASIC3.27□□□□□ -1.89
SHISA2Q6UWI4 AC004486.1-201ENST00000546846 233 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms