Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 SUB1P3-201ENST00000564581 315 ntBASIC1.97□□□□□ -2.09
SNX30Q5VWJ9 MZT1P2-201ENST00000604387 248 ntBASIC1.97□□□□□ -2.09
SNX30Q5VWJ9 MIR338-201ENST00000636369 67 ntBASIC1.97□□□□□ -2.09
SNX30Q5VWJ9 MIR1302-1-201ENST00000637932 143 ntBASIC1.97□□□□□ -2.09
SNX30Q5VWJ9 RNU6-112P-201ENST00000363599 104 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 RNU6-879P-201ENST00000364328 108 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 MIR1185-2-201ENST00000408687 86 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 Y_RNA.646-201ENST00000410980 101 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 HMGN2P34-201ENST00000437647 269 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 Y_RNA.702-201ENST00000516843 96 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 RNU7-4P-201ENST00000516961 62 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 RNU6-1213P-201ENST00000517075 94 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 AC080078.3-201ENST00000605407 463 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SNX30Q5VWJ9 AC010615.1-201ENST00000594254 1764 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 RNA5SP432-201ENST00000362480 116 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 RNA5SP213-201ENST00000391031 106 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 AL117342.1-201ENST00000404861 406 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 RNU2-7P-201ENST00000410794 178 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 CYCSP49-201ENST00000420810 319 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 AC099677.2-201ENST00000436385 175 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 UQCRBP2-201ENST00000447827 297 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 RPL30P15-201ENST00000457129 321 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 AC022493.2-201ENST00000506122 481 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 AL117351.2-201ENST00000513571 157 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 FRG2DP-202ENST00000566967 323 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 AL132765.2-201ENST00000610812 351 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 AC126177.8-201ENST00000618339 1015 ntBASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNX30Q5VWJ9 RNU6-661P-201ENST00000362409 107 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 RNU6-99P-201ENST00000364721 107 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 Y_RNA.557-201ENST00000384680 107 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 RNU6-1001P-201ENST00000411265 100 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 AC114482.1-201ENST00000418010 247 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 MTCO2P27-201ENST00000420740 428 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 AC091951.2-201ENST00000500762 203 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 AC108210.2-201ENST00000503681 201 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 HMGN1P13-201ENST00000505795 138 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 FGF7P4-201ENST00000509595 295 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 AC074133.1-201ENST00000515696 183 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 RNU6-875P-201ENST00000516488 106 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 RNU6-107P-201ENST00000516643 102 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 RNA5SP481-201ENST00000516814 122 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 AC144568.1-201ENST00000520139 137 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 AC024995.1-201ENST00000523014 93 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 GNAI2P1-201ENST00000541815 315 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 MIR3684-201ENST00000579779 74 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 AC104260.1-201ENST00000616660 539 ntBASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.94□□□□□ -2.1
SNX30Q5VWJ9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 Y_RNA.263-201ENST00000364659 114 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 Y_RNA.358-201ENST00000365491 99 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 RNU6-890P-201ENST00000384121 107 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 MIR9-3-201ENST00000385084 90 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 SNORA69.1-201ENST00000390904 137 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 FTH1P12-201ENST00000432137 551 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 AC010409.1-201ENST00000487382 476 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 RPL36AP21-201ENST00000490372 323 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 RNU6-277P-201ENST00000516272 106 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 RN7SKP49-201ENST00000516675 260 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 SNORA31.17-201ENST00000516953 127 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 AC022868.1-201ENST00000517767 391 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 AC125232.2-201ENST00000592457 143 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 AC022432.1-201ENST00000595739 310 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 MIR1244-1-201ENST00000612829 85 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 MIR1244-3-201ENST00000635744 85 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 MIR1244-2-201ENST00000636449 85 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 MIR1244-4-202ENST00000636813 85 ntBASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SNX30Q5VWJ9 RNU6-874P-201ENST00000362390 105 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 RNU6-1264P-201ENST00000383891 107 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 MIR329-1-201ENST00000385028 80 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 RNA5SP323-201ENST00000391094 133 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 RNU2-20P-201ENST00000410425 191 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 RNU6-470P-201ENST00000515954 104 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 MIR3198-2-201ENST00000577868 80 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 MIR3683-201ENST00000580847 82 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 MIR4769-201ENST00000584126 77 ntBASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.92□□□□□ -2.1
SNX30Q5VWJ9 AC073544.1-201ENST00000600110 1595 ntBASIC1.91□□□□□ -2.1
SNX30Q5VWJ9 RNU6-1145P-201ENST00000384246 107 ntBASIC1.91□□□□□ -2.1
SNX30Q5VWJ9 RNY3P14-201ENST00000384309 102 ntBASIC1.91□□□□□ -2.1
SNX30Q5VWJ9 RNU6-296P-201ENST00000384608 107 ntBASIC1.91□□□□□ -2.1
SNX30Q5VWJ9 RNU6-417P-201ENST00000384712 107 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms