Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL159152.1-201ENST00000635019 2587 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 MIR340-201ENST00000362125 95 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 MIR26A1-201ENST00000362205 77 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 RNU1-58P-201ENST00000362413 163 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 Y_RNA.149-201ENST00000363558 117 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-1175P-201ENST00000365200 107 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-937P-201ENST00000384325 106 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-21P-201ENST00000384710 107 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-713P-201ENST00000384761 107 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 SNORD115-46-201ENST00000390982 71 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 RNU2-54P-201ENST00000410299 190 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 RN7SL636P-201ENST00000497504 294 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-826P-201ENST00000516827 104 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 RNU7-110P-201ENST00000516891 62 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 AC008269.2-201ENST00000561915 1105 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 MIR5194-201ENST00000582634 120 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 MIR3670-2-201ENST00000582974 65 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 MIR3670-1-201ENST00000584160 65 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 MIR3670-3-201ENST00000584855 65 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 AC008749.1-201ENST00000597650 306 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 SNORD113-5-201ENST00000607261 78 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 MIR3670-4-201ENST00000612260 65 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 AC022202.1-201ENST00000613515 211 ntBASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC144BQ3MJ40 SNORD115-3-201ENST00000363100 82 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-23P-201ENST00000363283 107 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 AC009963.1-201ENST00000417265 157 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 AL121890.1-201ENST00000435457 205 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 AL353689.1-201ENST00000438895 199 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 AC005042.3-201ENST00000453230 174 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-1046P-201ENST00000516538 107 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 MIR4300-201ENST00000581016 96 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 AL162730.1-201ENST00000605734 292 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 U6.104-201ENST00000637979 90 ntBASIC3.01□□□□□ -1.93
CCDC144BQ3MJ40 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-1164P-201ENST00000364428 107 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-1105P-201ENST00000384774 107 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 HMGN2P39-201ENST00000398005 273 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 MIR1253-201ENST00000408273 105 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 MTATP8P1-201ENST00000467115 207 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 AC025465.3-201ENST00000510570 311 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3□□□□□ -1.93
CCDC144BQ3MJ40 AP002001.1-203ENST00000534002 267 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3□□□□□ -1.93
CCDC144BQ3MJ40 AC136932.1-201ENST00000574771 208 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 AC006435.5-201ENST00000624486 112 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 AC131280.1-202ENST00000624067 4211 ntBASIC3□□□□□ -1.93
CCDC144BQ3MJ40 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 RNA5SP493-201ENST00000364115 91 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 SNORD114-6-201ENST00000364393 72 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 SNORA70B-201ENST00000384210 135 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 Y_RNA.574-201ENST00000384766 95 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 RNA5SP465-201ENST00000391195 109 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 LINC01399-202ENST00000458450 244 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 AC010598.1-201ENST00000510378 103 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 RNU2-12P-201ENST00000517216 168 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 SUMO2P18-201ENST00000518873 252 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 SNORD53-201ENST00000579969 78 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 AC078899.2-201ENST00000595282 212 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 AC006001.4-201ENST00000622243 395 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 AC010297.1-201ENST00000623948 149 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 AC064859.1-201ENST00000624741 174 ntBASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC144BQ3MJ40 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-1309P-201ENST00000363305 108 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 RNA5SP393-201ENST00000363423 117 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-454P-201ENST00000364292 107 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 Y_RNA.243-201ENST00000364481 109 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 Y_RNA.446-201ENST00000384178 104 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 MIR518A2-201ENST00000384966 87 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 RNA5SP210-201ENST00000391034 120 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 MIR1302-3-201ENST00000408128 138 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 DYNLT3P2-201ENST00000442517 295 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 YWHAEP4-201ENST00000505390 198 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-155P-201ENST00000516347 100 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 AC055872.1-201ENST00000570978 278 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 MIR4529-201ENST00000578110 78 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 AC245884.12-201ENST00000615364 59 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 AL590240.4-201ENST00000616908 390 ntBASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC144BQ3MJ40 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 RNA5SP432-201ENST00000362480 116 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 SNORD114-7-201ENST00000362520 77 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 Y_RNA.101-201ENST00000363154 102 ntBASIC2.97□□□□□ -1.93
CCDC144BQ3MJ40 RNU6-271P-201ENST00000363858 105 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms