Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-376P-201ENST00000384731 106 ntBASIC-0.47□□□□□ -2.49
PRKDCP78527 RNU2-62P-201ENST00000410868 191 ntBASIC-0.47□□□□□ -2.49
PRKDCP78527 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.47□□□□□ -2.49
PRKDCP78527 MTND1P4-201ENST00000435196 415 ntBASIC-0.47□□□□□ -2.49
PRKDCP78527 AL139824.2-201ENST00000458731 1095 ntBASIC-0.47□□□□□ -2.49
PRKDCP78527 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.47□□□□□ -2.49
PRKDCP78527 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.47□□□□□ -2.49
PRKDCP78527 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.47□□□□□ -2.49
PRKDCP78527 AC133485.4-201ENST00000561835 220 ntBASIC-0.47□□□□□ -2.49
PRKDCP78527 AL359999.1-201ENST00000604513 294 ntBASIC-0.47□□□□□ -2.49
PRKDCP78527 snoZ196.1-201ENST00000625269 89 ntBASIC-0.47□□□□□ -2.49
PRKDCP78527 MTND4P4-201ENST00000439033 1366 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 RNU6-378P-201ENST00000384324 107 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 RNU6-424P-201ENST00000384367 105 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.48□□□□□ -2.49
PRKDCP78527 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.48□□□□□ -2.49
PRKDCP78527 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.48□□□□□ -2.49
PRKDCP78527 AC006026.2-201ENST00000457376 180 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 MTCO3P9-201ENST00000506989 781 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.48□□□□□ -2.49
PRKDCP78527 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 SNORD56.1-201ENST00000362913 68 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 MIR548L-201ENST00000408303 86 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.48□□□□□ -2.49
PRKDCP78527 AC103996.1-201ENST00000555468 102 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 AP000907.4-201ENST00000604143 237 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 AL034555.1-201ENST00000604816 211 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 AL159153.1-201ENST00000619688 317 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 RNU4-15P-201ENST00000362613 141 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 AL590135.1-201ENST00000422215 156 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 AC019205.3-201ENST00000424573 156 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.48□□□□□ -2.49
PRKDCP78527 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.48□□□□□ -2.49
PRKDCP78527 AC016700.2-201ENST00000446011 156 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 AC009237.7-201ENST00000447357 229 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.48□□□□□ -2.49
PRKDCP78527 AC015911.1-201ENST00000495111 156 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 MIR4778-201ENST00000577635 80 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 AC006927.4-201ENST00000639187 543 ntBASIC-0.48□□□□□ -2.49
PRKDCP78527 RNU6-613P-201ENST00000410412 108 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC093899.1-201ENST00000457984 376 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC119751.4-201ENST00000507498 357 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 RNU6-377P-201ENST00000515965 102 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC007684.1-201ENST00000609671 477 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC005520.5-201ENST00000613926 164 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 RNU6-527P-201ENST00000363425 104 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 SNORD14.1-201ENST00000365609 90 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.49□□□□□ -2.49
PRKDCP78527 RNU6-732P-201ENST00000516033 103 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 SNORA31.10-201ENST00000516482 106 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC100814.1-201ENST00000606963 623 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 RNU6-480P-201ENST00000384332 107 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 MIR526A1-201ENST00000384897 85 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 MIR802-201ENST00000390235 94 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 RPS3AP3-201ENST00000411933 242 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.49□□□□□ -2.49
PRKDCP78527 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.49□□□□□ -2.49
PRKDCP78527 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.49□□□□□ -2.49
PRKDCP78527 SNORA28-201ENST00000606769 126 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AL450472.1-202ENST00000637286 180 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.49□□□□□ -2.49
PRKDCP78527 ZNF885P-201ENST00000420174 1098 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 RNU7-43P-201ENST00000516554 64 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 DEFB131C-201ENST00000528817 165 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.49□□□□□ -2.49
PRKDCP78527 AL670379.3-201ENST00000605040 251 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 MIR6514-201ENST00000622549 70 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC027279.3-201ENST00000625055 122 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 AC132825.7-201ENST00000638744 335 ntBASIC-0.49□□□□□ -2.49
PRKDCP78527 MIR340-201ENST00000362125 95 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 RNU6-24P-201ENST00000384440 107 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 USP9YP29-201ENST00000445112 563 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 AC069271.1-201ENST00000445577 156 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.5□□□□□ -2.49
PRKDCP78527 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 MIR5692A1-201ENST00000580523 69 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 AC231657.1-201ENST00000624313 397 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 RNU6-396P-201ENST00000365369 105 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 MRPL42P3-201ENST00000401492 326 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 RNU2-42P-201ENST00000410697 113 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 AC007327.1-201ENST00000447461 264 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 AC007547.1-201ENST00000462177 490 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 MIR520C-201ENST00000385005 87 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 RNU6-440P-201ENST00000390882 105 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 MCFD2P1-201ENST00000417812 300 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 AC016632.1-201ENST00000503994 196 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.5□□□□□ -2.49
PRKDCP78527 RNU6-180P-201ENST00000516697 61 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 RNU1-117P-201ENST00000517041 158 ntBASIC-0.5□□□□□ -2.49
PRKDCP78527 SNORD115-2-201ENST00000362842 82 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms