Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RNA5SP437-201ENST00000517249 129 ntBASIC1.28□□□□□ -2.2
APOC4P55056 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.28□□□□□ -2.2
APOC4P55056 MIR4419B-201ENST00000577260 68 ntBASIC1.28□□□□□ -2.2
APOC4P55056 AC024614.2-201ENST00000577584 372 ntBASIC1.28□□□□□ -2.2
APOC4P55056 MIR3683-201ENST00000580847 82 ntBASIC1.28□□□□□ -2.2
APOC4P55056 AC005899.2-201ENST00000584353 90 ntBASIC1.28□□□□□ -2.2
APOC4P55056 AC125232.2-201ENST00000592457 143 ntBASIC1.28□□□□□ -2.2
APOC4P55056 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.28□□□□□ -2.2
APOC4P55056 AL669831.3-213ENST00000636676 183 ntBASIC1.28□□□□□ -2.2
APOC4P55056 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
APOC4P55056 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
APOC4P55056 MTND5P35-201ENST00000557537 1720 ntBASIC1.27□□□□□ -2.21
APOC4P55056 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.27□□□□□ -2.21
APOC4P55056 RNA5SP190-201ENST00000365222 118 ntBASIC1.27□□□□□ -2.21
APOC4P55056 Y_RNA.364-201ENST00000365532 101 ntBASIC1.27□□□□□ -2.21
APOC4P55056 RNU6-417P-201ENST00000384712 107 ntBASIC1.27□□□□□ -2.21
APOC4P55056 MIR520A-201ENST00000384862 85 ntBASIC1.27□□□□□ -2.21
APOC4P55056 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
APOC4P55056 RNU6-700P-201ENST00000391043 107 ntBASIC1.27□□□□□ -2.21
APOC4P55056 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.27□□□□□ -2.21
APOC4P55056 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.27□□□□□ -2.21
APOC4P55056 HSPE1P9-201ENST00000440046 311 ntBASIC1.27□□□□□ -2.21
APOC4P55056 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.27□□□□□ -2.21
APOC4P55056 Y_RNA.635-201ENST00000459041 101 ntBASIC1.27□□□□□ -2.21
APOC4P55056 RN7SL274P-201ENST00000492268 272 ntBASIC1.27□□□□□ -2.21
APOC4P55056 RNU6-1146P-201ENST00000516282 102 ntBASIC1.27□□□□□ -2.21
APOC4P55056 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.27□□□□□ -2.21
APOC4P55056 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.27□□□□□ -2.21
APOC4P55056 AC090617.3-201ENST00000573670 475 ntBASIC1.27□□□□□ -2.21
APOC4P55056 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.27□□□□□ -2.21
APOC4P55056 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.27□□□□□ -2.21
APOC4P55056 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
APOC4P55056 RNA5SP432-201ENST00000362480 116 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RNU6-1188P-201ENST00000363795 107 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RNA5SP99-201ENST00000364020 114 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RNU6-1240P-201ENST00000365155 104 ntBASIC1.26□□□□□ -2.21
APOC4P55056 Y_RNA.557-201ENST00000384680 107 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RNU6-997P-201ENST00000384725 107 ntBASIC1.26□□□□□ -2.21
APOC4P55056 MIR329-1-201ENST00000385028 80 ntBASIC1.26□□□□□ -2.21
APOC4P55056 SNORA67.5-201ENST00000391036 107 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RNU1-78P-201ENST00000391248 165 ntBASIC1.26□□□□□ -2.21
APOC4P55056 SUMO2P12-201ENST00000405924 140 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RNA5SP338-201ENST00000410495 85 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RNU6-1001P-201ENST00000411265 100 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RPS20P15-201ENST00000412792 311 ntBASIC1.26□□□□□ -2.21
APOC4P55056 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.26□□□□□ -2.21
APOC4P55056 AC008134.1-201ENST00000420943 193 ntBASIC1.26□□□□□ -2.21
APOC4P55056 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.26□□□□□ -2.21
APOC4P55056 U8.22-201ENST00000459141 133 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RPL17P19-201ENST00000489069 552 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RNU6-970P-201ENST00000516312 107 ntBASIC1.26□□□□□ -2.21
APOC4P55056 Y_RNA.683-201ENST00000516508 93 ntBASIC1.26□□□□□ -2.21
APOC4P55056 AC091144.1-201ENST00000519573 138 ntBASIC1.26□□□□□ -2.21
APOC4P55056 AC093023.1-201ENST00000547375 507 ntBASIC1.26□□□□□ -2.21
APOC4P55056 FRG2DP-202ENST00000566967 323 ntBASIC1.26□□□□□ -2.21
APOC4P55056 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.26□□□□□ -2.21
APOC4P55056 AC092794.2-201ENST00000620933 563 ntBASIC1.26□□□□□ -2.21
APOC4P55056 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.26□□□□□ -2.21
APOC4P55056 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
APOC4P55056 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
APOC4P55056 RNU1-17P-201ENST00000363022 152 ntBASIC1.25□□□□□ -2.21
APOC4P55056 RNU6-1145P-201ENST00000384246 107 ntBASIC1.25□□□□□ -2.21
APOC4P55056 RNU6-360P-201ENST00000390944 104 ntBASIC1.25□□□□□ -2.21
APOC4P55056 RNA5SP467-201ENST00000391274 118 ntBASIC1.25□□□□□ -2.21
APOC4P55056 Y_RNA.646-201ENST00000410980 101 ntBASIC1.25□□□□□ -2.21
APOC4P55056 RNU6-370P-201ENST00000411008 104 ntBASIC1.25□□□□□ -2.21
APOC4P55056 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.25□□□□□ -2.21
APOC4P55056 FTH1P12-201ENST00000432137 551 ntBASIC1.25□□□□□ -2.21
APOC4P55056 MTND4P18-201ENST00000447010 465 ntBASIC1.25□□□□□ -2.21
APOC4P55056 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.25□□□□□ -2.21
APOC4P55056 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.25□□□□□ -2.21
APOC4P55056 RNU6-120P-201ENST00000516077 103 ntBASIC1.25□□□□□ -2.21
APOC4P55056 APOOP3-201ENST00000536787 586 ntBASIC1.25□□□□□ -2.21
APOC4P55056 SNORD53B-201ENST00000577887 78 ntBASIC1.25□□□□□ -2.21
APOC4P55056 SNORA77B-201ENST00000578179 125 ntBASIC1.25□□□□□ -2.21
APOC4P55056 MIR4422-201ENST00000581938 83 ntBASIC1.25□□□□□ -2.21
APOC4P55056 MIR8081-201ENST00000611533 95 ntBASIC1.25□□□□□ -2.21
APOC4P55056 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.25□□□□□ -2.21
APOC4P55056 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.25□□□□□ -2.21
APOC4P55056 U6.108-201ENST00000637764 58 ntBASIC1.25□□□□□ -2.21
APOC4P55056 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
APOC4P55056 RNU6-310P-201ENST00000384655 107 ntBASIC1.24□□□□□ -2.21
APOC4P55056 MIR515-2-201ENST00000384883 83 ntBASIC1.24□□□□□ -2.21
APOC4P55056 MIR515-1-201ENST00000384884 83 ntBASIC1.24□□□□□ -2.21
APOC4P55056 MIR1253-201ENST00000408273 105 ntBASIC1.24□□□□□ -2.21
APOC4P55056 EBAG9P1-201ENST00000418955 543 ntBASIC1.24□□□□□ -2.21
APOC4P55056 CYCSP49-201ENST00000420810 319 ntBASIC1.24□□□□□ -2.21
APOC4P55056 snoU13.9-201ENST00000458927 103 ntBASIC1.24□□□□□ -2.21
APOC4P55056 RNU7-87P-201ENST00000459343 62 ntBASIC1.24□□□□□ -2.21
APOC4P55056 RPL26P26-201ENST00000480251 434 ntBASIC1.24□□□□□ -2.21
APOC4P55056 RPS29P11-201ENST00000496507 171 ntBASIC1.24□□□□□ -2.21
APOC4P55056 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.24□□□□□ -2.21
APOC4P55056 RNU6-307P-201ENST00000516743 106 ntBASIC1.24□□□□□ -2.21
APOC4P55056 AC004584.2-201ENST00000570407 410 ntBASIC1.24□□□□□ -2.21
APOC4P55056 MIR4255-201ENST00000579351 72 ntBASIC1.24□□□□□ -2.21
APOC4P55056 AL357075.2-201ENST00000614906 189 ntBASIC1.24□□□□□ -2.21
APOC4P55056 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
APOC4P55056 RNA5SP361-201ENST00000362686 118 ntBASIC1.23□□□□□ -2.21
APOC4P55056 Y_RNA.140-201ENST00000363474 103 ntBASIC1.23□□□□□ -2.21
APOC4P55056 Y_RNA.142-201ENST00000363491 102 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms