Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLCN3P51790 Y_RNA.105-201ENST00000363182 111 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 Y_RNA.210-201ENST00000364161 110 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 RNU6-1145P-201ENST00000384246 107 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 RNU6-196P-201ENST00000384315 107 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 MIR329-1-201ENST00000385028 80 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 MIR628-201ENST00000385229 95 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 MRPL35P1-201ENST00000404272 572 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 RNU6-121P-201ENST00000410525 99 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 AL731563.1-201ENST00000442202 214 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 IFNA11P-201ENST00000446352 526 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 AC245102.2-201ENST00000448956 180 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 AL137159.1-201ENST00000452808 512 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 PRELID3BP1-201ENST00000457142 540 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 snoU13.23-201ENST00000458863 104 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 RPL26P26-201ENST00000480251 434 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 RPS23P5-201ENST00000495419 428 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.22□□□□□ -2.05
CLCN3P51790 SNORA4.4-201ENST00000515921 135 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 RNU6-635P-201ENST00000516651 102 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 RNU6-897P-201ENST00000517135 105 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.22□□□□□ -2.05
CLCN3P51790 AC091144.1-201ENST00000519573 138 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 AC025754.2-201ENST00000606491 432 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 SNORD14A-201ENST00000606526 91 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 AC245884.12-201ENST00000615364 59 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 ZNF720P1-201ENST00000562403 1939 ntBASIC2.22□□□□□ -2.05
CLCN3P51790 Y_RNA.26-201ENST00000362539 101 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 RNA5SP361-201ENST00000362686 118 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 Y_RNA.99-201ENST00000363138 105 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 Y_RNA.176-201ENST00000363815 109 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 RNU6-472P-201ENST00000384299 107 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.21□□□□□ -2.06
CLCN3P51790 RNU7-87P-201ENST00000459343 62 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.21□□□□□ -2.06
CLCN3P51790 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.21□□□□□ -2.06
CLCN3P51790 Y_RNA.668-201ENST00000516233 93 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 RNU5F-4P-201ENST00000516581 114 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 RN7SKP49-201ENST00000516675 260 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 RNU6-1098P-201ENST00000516772 96 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 DEFB131C-201ENST00000528817 165 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.21□□□□□ -2.06
CLCN3P51790 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.21□□□□□ -2.06
CLCN3P51790 MIR4769-201ENST00000584126 77 ntBASIC2.21□□□□□ -2.06
CLCN3P51790 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.21□□□□□ -2.06
CLCN3P51790 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.21□□□□□ -2.06
CLCN3P51790 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CLCN3P51790 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.2□□□□□ -2.06
CLCN3P51790 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.2□□□□□ -2.06
CLCN3P51790 Y_RNA.152-201ENST00000363578 100 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 RNU6-873P-201ENST00000363833 107 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 Y_RNA.183-201ENST00000363882 113 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 RNU6-280P-201ENST00000364145 104 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 SNORA67.1-201ENST00000364749 141 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 SNORD31B-201ENST00000364977 69 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 RNU6-806P-201ENST00000365147 105 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 Y_RNA.332-201ENST00000365271 113 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 Y_RNA.471-201ENST00000384312 102 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 Y_RNA.512-201ENST00000384518 102 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 RNU6-541P-201ENST00000384709 110 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 MIR29C-201ENST00000385231 88 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 MIR524-201ENST00000385242 87 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 U8.13-201ENST00000390842 128 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 RNU6-1001P-201ENST00000411265 100 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.2□□□□□ -2.06
CLCN3P51790 WARS2P1-201ENST00000429678 537 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 AC009237.7-201ENST00000447357 229 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 AC093259.1-201ENST00000509755 300 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 MIR449C-201ENST00000516047 92 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 RNA5SP490-201ENST00000517141 136 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 AC015712.3-201ENST00000559380 164 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 AC004817.2-201ENST00000561794 651 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 AC233702.2-202ENST00000562547 291 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.2□□□□□ -2.06
CLCN3P51790 MIR3149-201ENST00000584629 83 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 RPS29P30-201ENST00000600975 111 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 AC240442.1-201ENST00000616055 283 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 MIR8062-201ENST00000621515 85 ntBASIC2.2□□□□□ -2.06
CLCN3P51790 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLCN3P51790 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CLCN3P51790 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLCN3P51790 SNORA18.2-201ENST00000383865 132 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 SNORD78.2-201ENST00000391076 69 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 MIR300-201ENST00000401138 83 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 AC004866.1-201ENST00000411748 78 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLCN3P51790 HMGN2P18-201ENST00000450680 270 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 AC007395.1-201ENST00000451333 677 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.19□□□□□ -2.06
CLCN3P51790 AC108210.2-201ENST00000503681 201 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 RNU6-344P-201ENST00000516635 111 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 RNU2-44P-201ENST00000516795 194 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 AC022868.1-201ENST00000517767 391 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.19□□□□□ -2.06
CLCN3P51790 DEFB122-202ENST00000569013 197 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 AC009127.3-201ENST00000570531 403 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 AC136932.1-201ENST00000574771 208 ntBASIC2.19□□□□□ -2.06
CLCN3P51790 MIR4423-201ENST00000580922 80 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms