Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MIR4676-201ENST00000583078 72 ntBASIC-0.7□□□□□ -2.52
HTTP42858 MIR4677-201ENST00000584153 80 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AC016597.2-201ENST00000613256 341 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AC010205.1-201ENST00000616668 449 ntBASIC-0.7□□□□□ -2.52
HTTP42858 AC092608.3-201ENST00000625017 386 ntBASIC-0.7□□□□□ -2.52
HTTP42858 RNU6-78P-201ENST00000362897 107 ntBASIC-0.71□□□□□ -2.52
HTTP42858 RNU6-843P-201ENST00000384454 104 ntBASIC-0.71□□□□□ -2.52
HTTP42858 MIR802-201ENST00000390235 94 ntBASIC-0.71□□□□□ -2.52
HTTP42858 MTND3P20-201ENST00000407663 186 ntBASIC-0.71□□□□□ -2.52
HTTP42858 MIR1298-201ENST00000408783 112 ntBASIC-0.71□□□□□ -2.52
HTTP42858 AC244250.2-201ENST00000418731 148 ntBASIC-0.71□□□□□ -2.52
HTTP42858 AC013262.1-201ENST00000426710 252 ntBASIC-0.71□□□□□ -2.52
HTTP42858 CALM2P4-201ENST00000430810 426 ntBASIC-0.71□□□□□ -2.52
HTTP42858 RPS24P1-201ENST00000438550 371 ntBASIC-0.71□□□□□ -2.52
HTTP42858 MIR5591-201ENST00000578248 65 ntBASIC-0.71□□□□□ -2.52
HTTP42858 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.71□□□□□ -2.52
HTTP42858 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.71□□□□□ -2.52
HTTP42858 SNORA67.2-201ENST00000384300 149 ntBASIC-0.71□□□□□ -2.52
HTTP42858 MIR549A-201ENST00000385268 96 ntBASIC-0.71□□□□□ -2.52
HTTP42858 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.71□□□□□ -2.52
HTTP42858 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.71□□□□□ -2.52
HTTP42858 RPL17P19-201ENST00000489069 552 ntBASIC-0.71□□□□□ -2.52
HTTP42858 AC010468.3-201ENST00000508225 458 ntBASIC-0.71□□□□□ -2.52
HTTP42858 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.71□□□□□ -2.52
HTTP42858 RNU2-34P-201ENST00000516534 121 ntBASIC-0.71□□□□□ -2.52
HTTP42858 AC012507.3-201ENST00000603556 477 ntBASIC-0.71□□□□□ -2.52
HTTP42858 AL158050.2-201ENST00000605336 568 ntBASIC-0.71□□□□□ -2.52
HTTP42858 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.71□□□□□ -2.52
HTTP42858 ZNF299P-201ENST00000406845 1804 ntBASIC-0.71□□□□□ -2.52
HTTP42858 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.71□□□□□ -2.52
HTTP42858 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.71□□□□□ -2.52
HTTP42858 RNU6-142P-201ENST00000384019 107 ntBASIC-0.71□□□□□ -2.52
HTTP42858 MCFD2P1-201ENST00000417812 300 ntBASIC-0.71□□□□□ -2.52
HTTP42858 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.71□□□□□ -2.52
HTTP42858 RNU7-14P-201ENST00000459331 62 ntBASIC-0.71□□□□□ -2.52
HTTP42858 TMEM251P1-201ENST00000503717 318 ntBASIC-0.71□□□□□ -2.52
HTTP42858 LARP7P2-201ENST00000575306 125 ntBASIC-0.71□□□□□ -2.52
HTTP42858 RNU6-487P-201ENST00000365430 104 ntBASIC-0.72□□□□□ -2.52
HTTP42858 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.72□□□□□ -2.52
HTTP42858 MTND4P25-201ENST00000441039 533 ntBASIC-0.72□□□□□ -2.52
HTTP42858 AC026616.1-201ENST00000523157 525 ntBASIC-0.72□□□□□ -2.52
HTTP42858 SNORD92-201ENST00000585078 85 ntBASIC-0.72□□□□□ -2.52
HTTP42858 AC110760.3-201ENST00000598794 467 ntBASIC-0.72□□□□□ -2.52
HTTP42858 AP002802.2-201ENST00000605877 235 ntBASIC-0.72□□□□□ -2.52
HTTP42858 AL118556.2-201ENST00000614375 824 ntBASIC-0.72□□□□□ -2.52
HTTP42858 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.72□□□□□ -2.52
HTTP42858 AC006927.4-201ENST00000639187 543 ntBASIC-0.72□□□□□ -2.52
HTTP42858 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.72□□□□□ -2.53
HTTP42858 RNU6-652P-201ENST00000365488 107 ntBASIC-0.72□□□□□ -2.53
HTTP42858 AL133264.1-201ENST00000407157 562 ntBASIC-0.72□□□□□ -2.53
HTTP42858 AC106883.1-201ENST00000418805 562 ntBASIC-0.72□□□□□ -2.53
HTTP42858 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.72□□□□□ -2.53
HTTP42858 RNU6-63P-201ENST00000516690 95 ntBASIC-0.72□□□□□ -2.53
HTTP42858 RNU6-703P-201ENST00000516946 107 ntBASIC-0.72□□□□□ -2.53
HTTP42858 MIR6129-201ENST00000616087 109 ntBASIC-0.72□□□□□ -2.53
HTTP42858 SCARNA4-201ENST00000629045 128 ntBASIC-0.72□□□□□ -2.53
HTTP42858 AC099654.9-201ENST00000637055 678 ntBASIC-0.72□□□□□ -2.53
HTTP42858 MIR101-2-201ENST00000362195 79 ntBASIC-0.73□□□□□ -2.53
HTTP42858 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MIR496-201ENST00000385226 102 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MTND3P4-201ENST00000453537 303 ntBASIC-0.73□□□□□ -2.53
HTTP42858 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.73□□□□□ -2.53
HTTP42858 AC107027.2-201ENST00000512197 115 ntBASIC-0.73□□□□□ -2.53
HTTP42858 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.73□□□□□ -2.53
HTTP42858 AC008521.1-201ENST00000587471 187 ntBASIC-0.73□□□□□ -2.53
HTTP42858 AC064872.1-201ENST00000604823 1072 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MIR6851-201ENST00000617060 67 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MIR6828-201ENST00000636181 60 ntBASIC-0.73□□□□□ -2.53
HTTP42858 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
HTTP42858 SNORA2.2-201ENST00000365473 135 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MIR10A-201ENST00000385043 110 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MIR516B2-201ENST00000385190 85 ntBASIC-0.73□□□□□ -2.53
HTTP42858 AL590002.1-201ENST00000406554 418 ntBASIC-0.73□□□□□ -2.53
HTTP42858 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.73□□□□□ -2.53
HTTP42858 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.73□□□□□ -2.53
HTTP42858 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.73□□□□□ -2.53
HTTP42858 RNU7-185P-201ENST00000459215 60 ntBASIC-0.73□□□□□ -2.53
HTTP42858 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.73□□□□□ -2.53
HTTP42858 SNORA31.14-201ENST00000516728 116 ntBASIC-0.73□□□□□ -2.53
HTTP42858 RNU6-706P-201ENST00000517229 104 ntBASIC-0.73□□□□□ -2.53
HTTP42858 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.73□□□□□ -2.53
HTTP42858 AL512347.1-201ENST00000566420 503 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MIR3179-1-201ENST00000578940 84 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MIR3179-2-201ENST00000579107 84 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MIR3179-3-201ENST00000579566 84 ntBASIC-0.73□□□□□ -2.53
HTTP42858 MIR3179-4-201ENST00000617599 84 ntBASIC-0.73□□□□□ -2.53
HTTP42858 SNORD32B-201ENST00000364460 84 ntBASIC-0.73□□□□□ -2.53
HTTP42858 SNORD56B-201ENST00000384713 71 ntBASIC-0.73□□□□□ -2.53
HTTP42858 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.73□□□□□ -2.53
HTTP42858 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.73□□□□□ -2.53
HTTP42858 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.73□□□□□ -2.53
HTTP42858 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.73□□□□□ -2.53
HTTP42858 AC010493.1-201ENST00000513479 292 ntBASIC-0.73□□□□□ -2.53
HTTP42858 RNU7-12P-201ENST00000516030 62 ntBASIC-0.73□□□□□ -2.53
HTTP42858 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.73□□□□□ -2.53
HTTP42858 AC121247.2-201ENST00000604776 136 ntBASIC-0.73□□□□□ -2.53
HTTP42858 AL450472.1-202ENST00000637286 180 ntBASIC-0.73□□□□□ -2.53
HTTP42858 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.74□□□□□ -2.53
HTTP42858 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.74□□□□□ -2.53
HTTP42858 RNU2-28P-201ENST00000410457 189 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms