Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC008834.1-201ENST00000511612 175 ntBASIC1.92□□□□□ -2.1
HADHAP40939 AC074133.1-201ENST00000515696 183 ntBASIC1.92□□□□□ -2.1
HADHAP40939 AC024995.1-201ENST00000523014 93 ntBASIC1.92□□□□□ -2.1
HADHAP40939 APOOP3-201ENST00000536787 586 ntBASIC1.92□□□□□ -2.1
HADHAP40939 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.92□□□□□ -2.1
HADHAP40939 MIR548S-201ENST00000581352 82 ntBASIC1.92□□□□□ -2.1
HADHAP40939 AC010615.1-201ENST00000594254 1764 ntBASIC1.92□□□□□ -2.1
HADHAP40939 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HADHAP40939 AC245060.5-201ENST00000610778 3293 ntBASIC1.92□□□□□ -2.1
HADHAP40939 RNU6-727P-201ENST00000363592 107 ntBASIC1.91□□□□□ -2.1
HADHAP40939 RNU6-310P-201ENST00000384655 107 ntBASIC1.91□□□□□ -2.1
HADHAP40939 U8.13-201ENST00000390842 128 ntBASIC1.91□□□□□ -2.1
HADHAP40939 RNU6-1009P-201ENST00000390996 107 ntBASIC1.91□□□□□ -2.1
HADHAP40939 RNU2-20P-201ENST00000410425 191 ntBASIC1.91□□□□□ -2.1
HADHAP40939 RPL31P63-201ENST00000422565 375 ntBASIC1.91□□□□□ -2.1
HADHAP40939 AC092423.1-201ENST00000430165 186 ntBASIC1.91□□□□□ -2.1
HADHAP40939 FTH1P12-201ENST00000432137 551 ntBASIC1.91□□□□□ -2.1
HADHAP40939 AL445305.1-201ENST00000432577 575 ntBASIC1.91□□□□□ -2.1
HADHAP40939 AC093019.1-201ENST00000443135 252 ntBASIC1.91□□□□□ -2.1
HADHAP40939 RNU7-87P-201ENST00000459343 62 ntBASIC1.91□□□□□ -2.1
HADHAP40939 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.91□□□□□ -2.1
HADHAP40939 RNA5SP481-201ENST00000516814 122 ntBASIC1.91□□□□□ -2.1
HADHAP40939 RNU7-4P-201ENST00000516961 62 ntBASIC1.91□□□□□ -2.1
HADHAP40939 MZT1P2-201ENST00000604387 248 ntBASIC1.91□□□□□ -2.1
HADHAP40939 AC006001.4-201ENST00000622243 395 ntBASIC1.91□□□□□ -2.1
HADHAP40939 ZNF72P-201ENST00000425869 1908 ntBASIC1.9□□□□□ -2.11
HADHAP40939 AL356292.1-201ENST00000283110 373 ntBASIC1.9□□□□□ -2.11
HADHAP40939 SNORD87-201ENST00000364849 89 ntBASIC1.9□□□□□ -2.11
HADHAP40939 Y_RNA.557-201ENST00000384680 107 ntBASIC1.9□□□□□ -2.11
HADHAP40939 MIR329-1-201ENST00000385028 80 ntBASIC1.9□□□□□ -2.11
HADHAP40939 Y_RNA.646-201ENST00000410980 101 ntBASIC1.9□□□□□ -2.11
HADHAP40939 HMGN2P34-201ENST00000437647 269 ntBASIC1.9□□□□□ -2.11
HADHAP40939 AC007677.1-201ENST00000445757 515 ntBASIC1.9□□□□□ -2.11
HADHAP40939 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
HADHAP40939 AC107393.1-201ENST00000512403 346 ntBASIC1.9□□□□□ -2.11
HADHAP40939 RN7SKP49-201ENST00000516675 260 ntBASIC1.9□□□□□ -2.11
HADHAP40939 RNU6-295P-201ENST00000516901 104 ntBASIC1.9□□□□□ -2.11
HADHAP40939 HSBP1P1-201ENST00000555205 166 ntBASIC1.9□□□□□ -2.11
HADHAP40939 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
HADHAP40939 AC125232.2-201ENST00000592457 143 ntBASIC1.9□□□□□ -2.11
HADHAP40939 AC022432.1-201ENST00000595739 310 ntBASIC1.9□□□□□ -2.11
HADHAP40939 AL132765.2-201ENST00000610812 351 ntBASIC1.9□□□□□ -2.11
HADHAP40939 AC104260.1-201ENST00000616660 539 ntBASIC1.9□□□□□ -2.11
HADHAP40939 AC126177.8-201ENST00000618339 1015 ntBASIC1.9□□□□□ -2.11
HADHAP40939 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HADHAP40939 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.89□□□□□ -2.11
HADHAP40939 Y_RNA.303-201ENST00000364998 94 ntBASIC1.89□□□□□ -2.11
HADHAP40939 RNU6-1145P-201ENST00000384246 107 ntBASIC1.89□□□□□ -2.11
HADHAP40939 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
HADHAP40939 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.89□□□□□ -2.11
HADHAP40939 ELOCP24-201ENST00000456370 334 ntBASIC1.89□□□□□ -2.11
HADHAP40939 MIR2053-201ENST00000459295 91 ntBASIC1.89□□□□□ -2.11
HADHAP40939 AC091951.2-201ENST00000500762 203 ntBASIC1.89□□□□□ -2.11
HADHAP40939 RNU6-277P-201ENST00000516272 106 ntBASIC1.89□□□□□ -2.11
HADHAP40939 RNU6-875P-201ENST00000516488 106 ntBASIC1.89□□□□□ -2.11
HADHAP40939 Y_RNA.702-201ENST00000516843 96 ntBASIC1.89□□□□□ -2.11
HADHAP40939 RNU6-1213P-201ENST00000517075 94 ntBASIC1.89□□□□□ -2.11
HADHAP40939 RNU6-548P-201ENST00000517083 115 ntBASIC1.89□□□□□ -2.11
HADHAP40939 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HADHAP40939 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.89□□□□□ -2.11
HADHAP40939 AC006435.5-201ENST00000624486 112 ntBASIC1.89□□□□□ -2.11
HADHAP40939 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.89□□□□□ -2.11
HADHAP40939 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
HADHAP40939 RNU6-874P-201ENST00000362390 105 ntBASIC1.88□□□□□ -2.11
HADHAP40939 SNORA63D-201ENST00000364359 132 ntBASIC1.88□□□□□ -2.11
HADHAP40939 Y_RNA.259-201ENST00000364619 101 ntBASIC1.88□□□□□ -2.11
HADHAP40939 Y_RNA.263-201ENST00000364659 114 ntBASIC1.88□□□□□ -2.11
HADHAP40939 RNU6-1264P-201ENST00000383891 107 ntBASIC1.88□□□□□ -2.11
HADHAP40939 MIR583-201ENST00000384846 75 ntBASIC1.88□□□□□ -2.11
HADHAP40939 MIR764-201ENST00000390811 85 ntBASIC1.88□□□□□ -2.11
HADHAP40939 RNU6-360P-201ENST00000390944 104 ntBASIC1.88□□□□□ -2.11
HADHAP40939 MIR934-201ENST00000401241 83 ntBASIC1.88□□□□□ -2.11
HADHAP40939 RNU6-1001P-201ENST00000411265 100 ntBASIC1.88□□□□□ -2.11
HADHAP40939 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.88□□□□□ -2.11
HADHAP40939 AC245047.4-201ENST00000433189 144 ntBASIC1.88□□□□□ -2.11
HADHAP40939 AC022493.2-201ENST00000506122 481 ntBASIC1.88□□□□□ -2.11
HADHAP40939 RNU6-470P-201ENST00000515954 104 ntBASIC1.88□□□□□ -2.11
HADHAP40939 SNORA31.17-201ENST00000516953 127 ntBASIC1.88□□□□□ -2.11
HADHAP40939 AC144568.1-201ENST00000520139 137 ntBASIC1.88□□□□□ -2.11
HADHAP40939 AC084364.2-201ENST00000546924 395 ntBASIC1.88□□□□□ -2.11
HADHAP40939 AK6P2-201ENST00000549020 471 ntBASIC1.88□□□□□ -2.11
HADHAP40939 FRG2DP-202ENST00000566967 323 ntBASIC1.88□□□□□ -2.11
HADHAP40939 MIR1302-1-201ENST00000637932 143 ntBASIC1.88□□□□□ -2.11
HADHAP40939 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
HADHAP40939 RNU6-879P-201ENST00000364328 108 ntBASIC1.87□□□□□ -2.11
HADHAP40939 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
HADHAP40939 RNU6-99P-201ENST00000364721 107 ntBASIC1.87□□□□□ -2.11
HADHAP40939 Y_RNA.358-201ENST00000365491 99 ntBASIC1.87□□□□□ -2.11
HADHAP40939 RNU6-890P-201ENST00000384121 107 ntBASIC1.87□□□□□ -2.11
HADHAP40939 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HADHAP40939 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HADHAP40939 SNORA69.1-201ENST00000390904 137 ntBASIC1.87□□□□□ -2.11
HADHAP40939 RNU2-7P-201ENST00000410794 178 ntBASIC1.87□□□□□ -2.11
HADHAP40939 AC016909.1-201ENST00000415916 166 ntBASIC1.87□□□□□ -2.11
HADHAP40939 AC114482.1-201ENST00000418010 247 ntBASIC1.87□□□□□ -2.11
HADHAP40939 MTCO2P27-201ENST00000420740 428 ntBASIC1.87□□□□□ -2.11
HADHAP40939 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
HADHAP40939 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.87□□□□□ -2.11
HADHAP40939 UQCRBP2-201ENST00000447827 297 ntBASIC1.87□□□□□ -2.11
HADHAP40939 PCNPP5-201ENST00000452246 481 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms