Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RNU6-296P-201ENST00000384608 107 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 MIR520A-201ENST00000384862 85 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 MIR10B-201ENST00000385011 110 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 MIR549A-201ENST00000385268 96 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 RNU6-700P-201ENST00000391043 107 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 RNU2-7P-201ENST00000410794 178 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 AC007098.1-201ENST00000420122 367 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.51□□□□□ -2.17
TRIM23P36406 FTH1P12-201ENST00000432137 551 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 Y_RNA.670-201ENST00000516255 105 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 RNA5SP481-201ENST00000516814 122 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 AC024995.1-201ENST00000523014 93 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.51□□□□□ -2.17
TRIM23P36406 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.51□□□□□ -2.17
TRIM23P36406 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.51□□□□□ -2.17
TRIM23P36406 MIR338-201ENST00000636369 67 ntBASIC1.51□□□□□ -2.17
TRIM23P36406 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TRIM23P36406 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TRIM23P36406 AC010615.1-201ENST00000594254 1764 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 MIR337-201ENST00000362281 93 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 Y_RNA.88-201ENST00000363029 99 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 Y_RNA.179-201ENST00000363844 90 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 RNU4-13P-201ENST00000364019 141 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 RNU1-96P-201ENST00000364163 162 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 SNORA63D-201ENST00000364359 132 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 RNU6-360P-201ENST00000390944 104 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 RNU6-876P-201ENST00000391295 104 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 MIR190B-201ENST00000401119 79 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 RPL23AP36-201ENST00000413895 458 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM23P36406 MTND3P23-201ENST00000431980 347 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 MTCO3P29-201ENST00000432119 779 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 RBMX2P4-201ENST00000441256 376 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 snoU13.9-201ENST00000458927 103 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 AP000870.1-201ENST00000472927 406 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 RPL36AP21-201ENST00000490372 323 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 RNU6-1041P-201ENST00000516254 102 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 AC025647.1-201ENST00000517879 253 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 MIR4498-201ENST00000577599 66 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 AL355802.3-201ENST00000607571 545 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 AC005014.2-201ENST00000607795 599 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 AL512598.1-201ENST00000610158 273 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 AC010999.1-201ENST00000611856 324 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 PISRT1.1-201ENST00000616930 107 ntBASIC1.5□□□□□ -2.17
TRIM23P36406 Y_RNA.2-201ENST00000362330 96 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 Y_RNA.364-201ENST00000365532 101 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 RNU6-281P-201ENST00000384212 103 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 MIR1323-201ENST00000408090 73 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 MIR1185-2-201ENST00000408687 86 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 MIR1267-201ENST00000408723 78 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 Y_RNA.595-201ENST00000410403 105 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 RNA5SP247-201ENST00000411181 105 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 SDAD1P3-201ENST00000427380 333 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 USP9YP16-201ENST00000430287 407 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 AC245047.4-201ENST00000433189 144 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 UBE2V1P7-201ENST00000446395 340 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 AC016717.1-201ENST00000448918 286 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.49□□□□□ -2.17
TRIM23P36406 USP9YP23-201ENST00000455085 407 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 RNU7-95P-201ENST00000459222 64 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 AC091179.3-201ENST00000474761 144 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 RNU1-117P-201ENST00000517041 158 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.49□□□□□ -2.17
TRIM23P36406 DNAJC19P9-201ENST00000555084 351 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.49□□□□□ -2.17
TRIM23P36406 AC090617.3-201ENST00000573670 475 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 AC025253.1-201ENST00000613623 543 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 AC099654.14-201ENST00000638599 341 ntBASIC1.49□□□□□ -2.17
TRIM23P36406 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
TRIM23P36406 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM23P36406 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRIM23P36406 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRIM23P36406 RNY1P16-201ENST00000363063 111 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 RNU6-1240P-201ENST00000365155 104 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 RNU6-338P-201ENST00000383888 105 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 RNU6-57P-201ENST00000411348 103 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 PDCL2P1-201ENST00000419302 352 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.48□□□□□ -2.17
TRIM23P36406 Y_RNA.635-201ENST00000459041 101 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 RNU6-1053P-201ENST00000515930 101 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 Y_RNA.683-201ENST00000516508 93 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 SNORA20.3-201ENST00000516880 132 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.48□□□□□ -2.17
TRIM23P36406 AC084364.2-201ENST00000546924 395 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 SUB1P3-201ENST00000564581 315 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 PRR13P7-201ENST00000605538 430 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 AC009229.3-201ENST00000608056 282 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 AC126177.8-201ENST00000618339 1015 ntBASIC1.48□□□□□ -2.17
TRIM23P36406 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM23P36406 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRIM23P36406 Y_RNA.184-201ENST00000363884 108 ntBASIC1.47□□□□□ -2.17
TRIM23P36406 MIR548B-201ENST00000385247 97 ntBASIC1.47□□□□□ -2.17
TRIM23P36406 AC138393.2-201ENST00000414742 246 ntBASIC1.47□□□□□ -2.17
TRIM23P36406 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.47□□□□□ -2.17
TRIM23P36406 EIF1P2-201ENST00000428233 350 ntBASIC1.47□□□□□ -2.17
TRIM23P36406 HMGN2P34-201ENST00000437647 269 ntBASIC1.47□□□□□ -2.17
TRIM23P36406 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms