Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU2-60P-201ENST00000517290 128 ntBASIC-0.85□□□□□ -2.55
CLIP1P30622 AC023632.1-201ENST00000518463 375 ntBASIC-0.85□□□□□ -2.55
CLIP1P30622 AP002453.2-201ENST00000533503 320 ntBASIC-0.85□□□□□ -2.55
CLIP1P30622 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.85□□□□□ -2.55
CLIP1P30622 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.85□□□□□ -2.55
CLIP1P30622 AC106754.1-201ENST00000562632 1513 ntBASIC-0.85□□□□□ -2.55
CLIP1P30622 MIRLET7C-201ENST00000362160 84 ntBASIC-0.86□□□□□ -2.55
CLIP1P30622 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.86□□□□□ -2.55
CLIP1P30622 RNU2-3P-201ENST00000410144 191 ntBASIC-0.86□□□□□ -2.55
CLIP1P30622 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.86□□□□□ -2.55
CLIP1P30622 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.86□□□□□ -2.55
CLIP1P30622 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.86□□□□□ -2.55
CLIP1P30622 AC023050.3-201ENST00000541142 333 ntBASIC-0.86□□□□□ -2.55
CLIP1P30622 AC009994.1-201ENST00000606889 253 ntBASIC-0.86□□□□□ -2.55
CLIP1P30622 AC010999.1-201ENST00000611856 324 ntBASIC-0.86□□□□□ -2.55
CLIP1P30622 U6.42-201ENST00000618440 107 ntBASIC-0.86□□□□□ -2.55
CLIP1P30622 RNU6-853P-201ENST00000364306 107 ntBASIC-0.87□□□□□ -2.55
CLIP1P30622 SNORA25.7-201ENST00000364375 127 ntBASIC-0.87□□□□□ -2.55
CLIP1P30622 AC098592.1-201ENST00000419352 333 ntBASIC-0.87□□□□□ -2.55
CLIP1P30622 RPS24P1-201ENST00000438550 371 ntBASIC-0.87□□□□□ -2.55
CLIP1P30622 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.87□□□□□ -2.55
CLIP1P30622 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.87□□□□□ -2.55
CLIP1P30622 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.87□□□□□ -2.55
CLIP1P30622 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.87□□□□□ -2.55
CLIP1P30622 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.87□□□□□ -2.55
CLIP1P30622 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.87□□□□□ -2.55
CLIP1P30622 MIR4752-201ENST00000579672 72 ntBASIC-0.87□□□□□ -2.55
CLIP1P30622 AC090186.1-201ENST00000605991 572 ntBASIC-0.87□□□□□ -2.55
CLIP1P30622 AL442067.1-201ENST00000613261 223 ntBASIC-0.87□□□□□ -2.55
CLIP1P30622 RNU6-562P-201ENST00000362731 107 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 RNA5SP48-201ENST00000363969 126 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 RNA5SP117-201ENST00000365294 118 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 SNORD51.1-201ENST00000365405 77 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 RNU6-692P-201ENST00000384496 107 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 RNU4-22P-201ENST00000411058 166 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.88□□□□□ -2.55
CLIP1P30622 AC016632.1-201ENST00000503994 196 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 AC026414.1-201ENST00000504046 698 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 AC112206.4-201ENST00000515142 405 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 AP001372.4-201ENST00000524889 472 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 DEFB108A-201ENST00000530110 222 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.88□□□□□ -2.55
CLIP1P30622 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.88□□□□□ -2.55
CLIP1P30622 MIR4263-201ENST00000584745 83 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 MIR4436A-201ENST00000585278 85 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 DEFB131E-202ENST00000602581 683 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 AL139286.2-201ENST00000606838 396 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 uc_338.28-201ENST00000612082 187 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 MIR6514-201ENST00000622549 70 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 AC099654.8-201ENST00000637757 681 ntBASIC-0.88□□□□□ -2.55
CLIP1P30622 RNU6-289P-201ENST00000364093 107 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 RNU2-42P-201ENST00000410697 113 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 RNU6-504P-201ENST00000516568 104 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 SNORA18.7-201ENST00000516910 131 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
CLIP1P30622 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.89□□□□□ -2.55
CLIP1P30622 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 ZNF204P-201ENST00000416749 2397 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 RNU6-549P-201ENST00000384433 107 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 RNU6-278P-201ENST00000390945 109 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 MIR208B-201ENST00000401172 77 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.89□□□□□ -2.55
CLIP1P30622 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.89□□□□□ -2.55
CLIP1P30622 RNU7-94P-201ENST00000459576 63 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 RNU7-99P-201ENST00000516271 62 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 SNORA74.3-201ENST00000517108 154 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 AC109479.2-201ENST00000517842 174 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 AC025647.1-201ENST00000517879 253 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 MIR3152-201ENST00000579801 74 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 AC006380.1-201ENST00000603598 186 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 AL121992.2-201ENST00000606262 256 ntBASIC-0.89□□□□□ -2.55
CLIP1P30622 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.9□□□□□ -2.55
CLIP1P30622 MIR578-201ENST00000384828 96 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
CLIP1P30622 SNORD65.1-201ENST00000390889 71 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 SNORA26.3-201ENST00000391119 136 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 AL355143.1-201ENST00000407101 841 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 RNU6-293P-201ENST00000411259 106 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 AC090960.1-201ENST00000421072 306 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.9□□□□□ -2.55
CLIP1P30622 AC007215.1-201ENST00000464893 276 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 AC116562.3-201ENST00000506136 177 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 RNU6-150P-201ENST00000516237 95 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 AC023442.1-201ENST00000531247 422 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 AL512347.1-201ENST00000566420 503 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 NAMPTP3-201ENST00000569273 224 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 AC008250.2-201ENST00000615261 205 ntBASIC-0.9□□□□□ -2.55
CLIP1P30622 RNU6-552P-201ENST00000362869 119 ntBASIC-0.91□□□□□ -2.56
CLIP1P30622 SNORA72.1-201ENST00000363485 129 ntBASIC-0.91□□□□□ -2.56
CLIP1P30622 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.91□□□□□ -2.56
CLIP1P30622 RNU6-190P-201ENST00000384154 102 ntBASIC-0.91□□□□□ -2.56
CLIP1P30622 MIR563-201ENST00000385080 79 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms