Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 HMGN1P18-201ENST00000457642 277 ntBASIC3□□□□□ -1.93
VAMP1P23763 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3□□□□□ -1.93
VAMP1P23763 AC091021.1-201ENST00000468051 388 ntBASIC3□□□□□ -1.93
VAMP1P23763 TRBV12-1-201ENST00000479785 344 ntBASIC3□□□□□ -1.93
VAMP1P23763 RN7SL20P-201ENST00000488827 297 ntBASIC3□□□□□ -1.93
VAMP1P23763 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3□□□□□ -1.93
VAMP1P23763 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3□□□□□ -1.93
VAMP1P23763 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3□□□□□ -1.93
VAMP1P23763 Z83818.1-201ENST00000603584 150 ntBASIC3□□□□□ -1.93
VAMP1P23763 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3□□□□□ -1.93
VAMP1P23763 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3□□□□□ -1.93
VAMP1P23763 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VAMP1P23763 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VAMP1P23763 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
VAMP1P23763 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VAMP1P23763 RNU6-1020P-201ENST00000363684 107 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 RNU6-1019P-201ENST00000364424 107 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 RNA5SP130-201ENST00000364431 114 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 AL139156.1-201ENST00000412785 841 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 AC099677.2-201ENST00000436385 175 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 AC091153.1-201ENST00000466297 402 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 RNU2-56P-201ENST00000516826 190 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 RNU6-182P-201ENST00000516970 105 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 AC011604.1-201ENST00000545978 196 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 AC127455.1-201ENST00000565496 145 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 RN7SL600P-201ENST00000581811 299 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 RPL12P50-201ENST00000603116 116 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 ARF4P1-201ENST00000605447 541 ntBASIC2.99□□□□□ -1.93
VAMP1P23763 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.98□□□□□ -1.93
VAMP1P23763 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
VAMP1P23763 Y_RNA.29-201ENST00000362570 113 ntBASIC2.98□□□□□ -1.93
VAMP1P23763 RNU6-923P-201ENST00000364753 107 ntBASIC2.98□□□□□ -1.93
VAMP1P23763 AC093578.1-201ENST00000415219 368 ntBASIC2.98□□□□□ -1.93
VAMP1P23763 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.98□□□□□ -1.93
VAMP1P23763 RPS4XP11-201ENST00000446897 772 ntBASIC2.98□□□□□ -1.93
VAMP1P23763 RPL23AP67-201ENST00000465341 474 ntBASIC2.98□□□□□ -1.93
VAMP1P23763 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.98□□□□□ -1.93
VAMP1P23763 RNU6-1291P-201ENST00000516591 104 ntBASIC2.98□□□□□ -1.93
VAMP1P23763 Y_RNA.700-201ENST00000516806 100 ntBASIC2.98□□□□□ -1.93
VAMP1P23763 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.98□□□□□ -1.93
VAMP1P23763 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VAMP1P23763 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VAMP1P23763 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
VAMP1P23763 RNU4-17P-201ENST00000365598 141 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VAMP1P23763 RNU6-493P-201ENST00000391321 108 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 MIR1283-2-201ENST00000408621 87 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 Z98949.2-201ENST00000440996 144 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 AC023449.1-201ENST00000454464 154 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 RNU6-437P-201ENST00000459408 95 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 RNA5SP57-201ENST00000459463 123 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.97□□□□□ -1.93
VAMP1P23763 SNORA64.4-201ENST00000516632 81 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 RNU6-579P-201ENST00000516879 102 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.97□□□□□ -1.93
VAMP1P23763 AC245884.12-201ENST00000615364 59 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 MIR7703-201ENST00000620784 77 ntBASIC2.97□□□□□ -1.93
VAMP1P23763 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
VAMP1P23763 RNA5SP383-201ENST00000362934 120 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 Y_RNA.274-201ENST00000364714 101 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 MIR192-201ENST00000384915 110 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 RN7SKP156-201ENST00000410308 342 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 RN7SKP58-201ENST00000411010 305 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 AL035423.1-201ENST00000420331 213 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 Y_RNA.644-201ENST00000459006 113 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.96□□□□□ -1.94
VAMP1P23763 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.96□□□□□ -1.94
VAMP1P23763 HMGB3P3-201ENST00000510526 400 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 Y_RNA.674-201ENST00000516362 113 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 SNORA31.9-201ENST00000516429 84 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 SNORA31.25-201ENST00000517242 134 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 SNORA81.3-201ENST00000517283 198 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 AP003730.1-201ENST00000524605 285 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 AC026333.2-201ENST00000542164 106 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 MIR2681-201ENST00000581814 105 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.96□□□□□ -1.94
VAMP1P23763 JPX_2.1-201ENST00000614161 69 ntBASIC2.96□□□□□ -1.94
VAMP1P23763 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VAMP1P23763 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.96□□□□□ -1.94
VAMP1P23763 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.96□□□□□ -1.94
VAMP1P23763 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VAMP1P23763 RNU4-41P-201ENST00000364426 143 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 AL512604.1-201ENST00000404812 257 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 RN7SL499P-201ENST00000481141 276 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.95□□□□□ -1.94
VAMP1P23763 MIR2276-201ENST00000516886 89 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 AC084364.2-201ENST00000546924 395 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 MIR4284-201ENST00000578924 81 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 MIR3200-201ENST00000580767 85 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 AC006023.1-201ENST00000603944 259 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 MIR6500-201ENST00000622700 86 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 MAPK10-266ENST00000641066 6555 ntBASIC2.95□□□□□ -1.94
VAMP1P23763 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VAMP1P23763 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VAMP1P23763 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VAMP1P23763 Y_RNA.24-201ENST00000362508 103 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 RNA5SP393-201ENST00000363423 117 ntBASIC2.94□□□□□ -1.94
VAMP1P23763 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VAMP1P23763 RPL21P65-201ENST00000406094 466 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms