Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AP004217.1-201ENST00000480579 346 ntBASIC3□□□□□ -1.93
PTPN1P18031 AC091826.1-201ENST00000514065 313 ntBASIC3□□□□□ -1.93
PTPN1P18031 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
PTPN1P18031 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3□□□□□ -1.93
PTPN1P18031 MIR3199-1-201ENST00000582434 88 ntBASIC3□□□□□ -1.93
PTPN1P18031 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3□□□□□ -1.93
PTPN1P18031 ELOCP29-201ENST00000588193 334 ntBASIC3□□□□□ -1.93
PTPN1P18031 AC090115.4-201ENST00000609970 188 ntBASIC3□□□□□ -1.93
PTPN1P18031 AC092435.3-201ENST00000565538 3654 ntBASIC3□□□□□ -1.93
PTPN1P18031 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3□□□□□ -1.93
PTPN1P18031 Y_RNA.233-201ENST00000364407 101 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 SNORA68.1-201ENST00000364537 132 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 RNU6-234P-201ENST00000365229 104 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 RNU6-493P-201ENST00000391321 108 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 MIR1283-1-201ENST00000408494 87 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 MIR1185-2-201ENST00000408687 86 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN1P18031 AC087499.2-201ENST00000432861 149 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 RN7SKP132-201ENST00000516001 208 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN1P18031 AC105245.1-201ENST00000581934 244 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 MIR4753-201ENST00000585119 83 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN1P18031 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN1P18031 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN1P18031 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN1P18031 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN1P18031 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.99□□□□□ -1.93
PTPN1P18031 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN1P18031 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
PTPN1P18031 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN1P18031 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PTPN1P18031 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
PTPN1P18031 Z82209.1-201ENST00000422141 2135 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN1P18031 U8.9-201ENST00000365667 134 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 RNU6-763P-201ENST00000390865 106 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 SNORA26.7-201ENST00000391288 122 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 MIR1289-1-201ENST00000408836 144 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 BMS1P22-201ENST00000414726 313 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 AC105272.1-201ENST00000438604 198 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 AC074290.1-201ENST00000448883 135 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 Y_RNA.637-201ENST00000459424 114 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 RNA5SP76-201ENST00000516277 87 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 AC109329.2-201ENST00000519658 482 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 AC018630.3-201ENST00000542637 96 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 AC079600.2-201ENST00000550076 130 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
PTPN1P18031 GTF3AP2-201ENST00000557014 266 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN1P18031 MIR5692C2-201ENST00000577959 77 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 MIR3684-201ENST00000579779 74 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 MIR4308-201ENST00000580634 81 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 AC069294.1-201ENST00000608397 350 ntBASIC2.98□□□□□ -1.93
PTPN1P18031 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN1P18031 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN1P18031 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN1P18031 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN1P18031 RNU6-653P-201ENST00000363074 106 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 Y_RNA.361-201ENST00000365515 120 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 Y_RNA.435-201ENST00000384095 112 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 SNORA40.19-201ENST00000390846 128 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 AL139095.1-201ENST00000404326 391 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 AC104332.2-201ENST00000429959 156 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 AL135790.2-201ENST00000437701 267 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN1P18031 RNU7-57P-201ENST00000459540 60 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 AC114982.1-201ENST00000469402 321 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 AC074198.2-201ENST00000508153 258 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 ATP5EP1-201ENST00000510257 156 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 Y_RNA.662-201ENST00000516028 97 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 AC136628.3-201ENST00000521868 290 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 AL078604.3-201ENST00000615580 211 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
PTPN1P18031 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PTPN1P18031 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PTPN1P18031 AC080128.1-201ENST00000474389 1917 ntBASIC2.97□□□□□ -1.93
PTPN1P18031 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
PTPN1P18031 RNU6-801P-201ENST00000364087 105 ntBASIC2.96□□□□□ -1.94
PTPN1P18031 SNORD31B-201ENST00000364977 69 ntBASIC2.96□□□□□ -1.94
PTPN1P18031 SNORA11.2-201ENST00000408318 127 ntBASIC2.96□□□□□ -1.94
PTPN1P18031 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PTPN1P18031 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.96□□□□□ -1.94
PTPN1P18031 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.96□□□□□ -1.94
PTPN1P18031 AC090515.1-201ENST00000465295 476 ntBASIC2.96□□□□□ -1.94
PTPN1P18031 HMGB3P3-201ENST00000510526 400 ntBASIC2.96□□□□□ -1.94
PTPN1P18031 SNORA70.12-201ENST00000516084 153 ntBASIC2.96□□□□□ -1.94
PTPN1P18031 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
PTPN1P18031 RNU6-1212P-201ENST00000517023 104 ntBASIC2.96□□□□□ -1.94
PTPN1P18031 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.96□□□□□ -1.94
PTPN1P18031 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.96□□□□□ -1.94
PTPN1P18031 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.96□□□□□ -1.94
PTPN1P18031 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PTPN1P18031 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms