Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF40AO75400 AC008134.1-201ENST00000420943 193 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 EEF1B2P7-201ENST00000451177 676 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 AL137159.1-201ENST00000452808 512 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 RNU2-34P-201ENST00000516534 121 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.5□□□□□ -1.85
PRPF40AO75400 MIR5692C2-201ENST00000577959 77 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 YPEL5P2-201ENST00000605553 359 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 AL365434.2-201ENST00000607979 234 ntBASIC3.5□□□□□ -1.85
PRPF40AO75400 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PRPF40AO75400 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PRPF40AO75400 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.5□□□□□ -1.85
PRPF40AO75400 AC138915.1-201ENST00000565427 1685 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 SNORD114-7-201ENST00000362520 77 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 SNORA72.4-201ENST00000384174 132 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 SNORA26.5-201ENST00000391215 123 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 MTCO2P33-201ENST00000402100 465 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 AL121890.1-201ENST00000435457 205 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 AL135790.2-201ENST00000437701 267 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 RPL23AP7-203ENST00000449021 469 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 U8.19-201ENST00000459095 133 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 RN7SL504P-201ENST00000494496 287 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 AC010598.1-201ENST00000510378 103 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 HMGB3P3-201ENST00000510526 400 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.49□□□□□ -1.85
PRPF40AO75400 AC027419.1-201ENST00000522976 328 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.49□□□□□ -1.85
PRPF40AO75400 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 MIR8057-201ENST00000620957 69 ntBASIC3.49□□□□□ -1.85
PRPF40AO75400 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF40AO75400 AC092435.3-201ENST00000565538 3654 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.48□□□□□ -1.85
PRPF40AO75400 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF40AO75400 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF40AO75400 Y_RNA.124-201ENST00000363339 93 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 RNU6-525P-201ENST00000363685 104 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 RNU6-682P-201ENST00000363843 106 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 Y_RNA.233-201ENST00000364407 101 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 RNU6-407P-201ENST00000365280 104 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 RNU6-918P-201ENST00000391219 106 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 MIR887-201ENST00000401258 79 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 AL355796.1-201ENST00000406706 323 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 RNA5SP344-201ENST00000411081 104 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 AL451074.5-201ENST00000415894 435 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.48□□□□□ -1.85
PRPF40AO75400 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.48□□□□□ -1.85
PRPF40AO75400 SNORD65B-201ENST00000459126 73 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.48□□□□□ -1.85
PRPF40AO75400 RNU6-991P-201ENST00000516168 107 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 RNA5SP76-201ENST00000516277 87 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.48□□□□□ -1.85
PRPF40AO75400 AL355596.1-201ENST00000565399 3996 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 AL161431.1-201ENST00000618966 4205 ntBASIC3.48□□□□□ -1.85
PRPF40AO75400 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
PRPF40AO75400 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PRPF40AO75400 AC073325.2-201ENST00000339545 159 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 RNU6-653P-201ENST00000363074 106 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 RNU6-899P-201ENST00000363947 107 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 SNORD15B-201ENST00000384714 146 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 AL590004.2-201ENST00000404787 371 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 AC104332.2-201ENST00000429959 156 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF40AO75400 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF40AO75400 AC091826.1-201ENST00000514065 313 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 Y_RNA.662-201ENST00000516028 97 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 PRELID2P1-201ENST00000552837 301 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 AL137100.2-201ENST00000555786 315 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 MIR4308-201ENST00000580634 81 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 AC013791.1-201ENST00000616619 62 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 MIR6733-201ENST00000635723 61 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF40AO75400 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF40AO75400 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF40AO75400 AC134026.1-201ENST00000623249 2239 ntBASIC3.47□□□□□ -1.85
PRPF40AO75400 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF40AO75400 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PRPF40AO75400 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF40AO75400 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF40AO75400 AL159152.1-201ENST00000635019 2587 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF40AO75400 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF40AO75400 SNORA27.1-201ENST00000362604 124 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 RNU6-1048P-201ENST00000364054 107 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 Y_RNA.293-201ENST00000364908 93 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 Y_RNA.310-201ENST00000365063 113 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 RNU4-17P-201ENST00000365598 141 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 PCNPP3-201ENST00000393579 471 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 RN7SKP220-201ENST00000410611 288 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 AC025647.1-201ENST00000517879 253 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 UBL5P2-201ENST00000583788 219 ntBASIC3.46□□□□□ -1.86
PRPF40AO75400 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF40AO75400 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PRPF40AO75400 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF40AO75400 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.45□□□□□ -1.86
PRPF40AO75400 RNA5SP125-201ENST00000364843 120 ntBASIC3.45□□□□□ -1.86
PRPF40AO75400 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PRPF40AO75400 SNORA48.5-201ENST00000391143 135 ntBASIC3.45□□□□□ -1.86
PRPF40AO75400 MIR548M-201ENST00000408260 86 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms