Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.09□□□□□ -2.07
ZIC3O60481 MTND3P2-201ENST00000438452 342 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 AL731563.1-201ENST00000442202 214 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 LINC01399-202ENST00000458450 244 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 AC010531.2-201ENST00000465012 153 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 AC114982.1-201ENST00000469402 321 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.09□□□□□ -2.07
ZIC3O60481 AC025465.3-201ENST00000510570 311 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.09□□□□□ -2.07
ZIC3O60481 RNU6-107P-201ENST00000516643 102 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 RNU6-635P-201ENST00000516651 102 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 SNORA40.15-201ENST00000516884 107 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 AC091544.4-201ENST00000555268 342 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.09□□□□□ -2.07
ZIC3O60481 AC008269.2-201ENST00000561915 1105 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.09□□□□□ -2.07
ZIC3O60481 AC022202.1-201ENST00000613515 211 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 AC130454.1-201ENST00000622948 401 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
ZIC3O60481 LINC02555-201ENST00000563933 1951 ntBASIC2.09□□□□□ -2.08
ZIC3O60481 MTND5P6-201ENST00000422338 1798 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.08□□□□□ -2.08
ZIC3O60481 Y_RNA.19-201ENST00000362462 99 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 Y_RNA.64-201ENST00000362845 102 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 Y_RNA.570-201ENST00000384750 101 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 Y_RNA.574-201ENST00000384766 95 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ZIC3O60481 EDDM3CP-201ENST00000415977 425 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 AC016717.1-201ENST00000448918 286 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.08□□□□□ -2.08
ZIC3O60481 RNY3P15-201ENST00000516297 97 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 RNU6-948P-201ENST00000516374 107 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 MIR4300-201ENST00000581016 96 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 AC005176.2-201ENST00000596933 147 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
ZIC3O60481 AC004467.1-201ENST00000615678 330 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 AC064859.1-201ENST00000624741 174 ntBASIC2.08□□□□□ -2.08
ZIC3O60481 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZIC3O60481 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZIC3O60481 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
ZIC3O60481 Y_RNA.47-201ENST00000362697 108 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 Y_RNA.99-201ENST00000363138 105 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 Y_RNA.101-201ENST00000363154 102 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 Y_RNA.222-201ENST00000364264 102 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 RNU6-454P-201ENST00000364292 107 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 RNU1-51P-201ENST00000365345 176 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.07□□□□□ -2.08
ZIC3O60481 RNU6-1310P-201ENST00000384153 107 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 MIR568-201ENST00000385036 95 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 SNORA3.2-201ENST00000408221 125 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 RNU5A-5P-201ENST00000411054 116 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 MTCYBP9-201ENST00000431021 303 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 DYNLT3P2-201ENST00000442517 295 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 AL357134.1-201ENST00000445848 426 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 AC074290.1-201ENST00000448883 135 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 RNU6-221P-201ENST00000459541 99 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.07□□□□□ -2.08
ZIC3O60481 MTCO2P24-201ENST00000515611 426 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 RNU6-1143P-201ENST00000516125 104 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 RNU2-34P-201ENST00000516534 121 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 SNORA31.15-201ENST00000516771 132 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.07□□□□□ -2.08
ZIC3O60481 MIR376A1-201ENST00000616574 68 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 snoZ196.1-201ENST00000625269 89 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.07□□□□□ -2.08
ZIC3O60481 AC009487.4-201ENST00000624969 3585 ntBASIC2.07□□□□□ -2.08
ZIC3O60481 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
ZIC3O60481 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZIC3O60481 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
ZIC3O60481 RNU6-238P-201ENST00000363313 106 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 Y_RNA.176-201ENST00000363815 109 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RNU6-1235P-201ENST00000384559 107 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RNA5SP475-201ENST00000410568 110 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RN7SKP284-201ENST00000411002 343 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 AC139712.2-201ENST00000424302 339 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RNU6-498P-201ENST00000459468 107 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RN7SL429P-201ENST00000479090 223 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RN7SL489P-201ENST00000486185 223 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RN7SL327P-201ENST00000488659 223 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RNU6-966P-201ENST00000516479 104 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 MYL12BP1-201ENST00000569826 507 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 AC026271.5-201ENST00000577873 130 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.06□□□□□ -2.08
ZIC3O60481 AC022441.3-201ENST00000605737 136 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 AC013412.1-201ENST00000610687 192 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 RN7SL853P-201ENST00000617250 223 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 AC091932.3-201ENST00000624223 323 ntBASIC2.06□□□□□ -2.08
ZIC3O60481 Y_RNA.149-201ENST00000363558 117 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 SNORD114-6-201ENST00000364393 72 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 RNU6-1164P-201ENST00000364428 107 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 RNU1-91P-201ENST00000364746 163 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 RNU6-1175P-201ENST00000365200 107 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 SNORD14D-201ENST00000384390 87 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 Y_RNA.512-201ENST00000384518 102 ntBASIC2.05□□□□□ -2.08
ZIC3O60481 RNU6-1199P-201ENST00000411249 104 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms