Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.29□□□□□ -1.88
SRGAP3O43295 DEFB131C-201ENST00000528817 165 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.29□□□□□ -1.88
SRGAP3O43295 RNU6-91P-201ENST00000607774 107 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.29□□□□□ -1.88
SRGAP3O43295 SCARNA15.3-201ENST00000626315 122 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 SCARNA4.1-201ENST00000628597 123 ntBASIC3.29□□□□□ -1.88
SRGAP3O43295 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SRGAP3O43295 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.28□□□□□ -1.88
SRGAP3O43295 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.28□□□□□ -1.88
SRGAP3O43295 FAM35CP-201ENST00000554755 2470 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRGAP3O43295 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.28□□□□□ -1.88
SRGAP3O43295 Y_RNA.75-201ENST00000362927 97 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 Y_RNA.121-201ENST00000363309 113 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 RNU4-84P-201ENST00000364200 139 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRGAP3O43295 AL031003.1-201ENST00000404229 172 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 SNORD88.1-201ENST00000408684 91 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 RNU2-37P-201ENST00000410695 177 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 RNU2-51P-201ENST00000410708 197 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 AL162725.1-201ENST00000435405 301 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 SNORD116-25-201ENST00000516517 92 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 RNU6-344P-201ENST00000516635 111 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.28□□□□□ -1.88
SRGAP3O43295 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 AC068205.3-201ENST00000636385 468 ntBASIC3.28□□□□□ -1.88
SRGAP3O43295 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRGAP3O43295 RNU6-151P-201ENST00000364158 107 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 Y_RNA.215-201ENST00000364204 112 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 Y_RNA.293-201ENST00000364908 93 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 SNORA26.5-201ENST00000391215 123 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 AIMP1P2-201ENST00000425294 312 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 AL135790.2-201ENST00000437701 267 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SRGAP3O43295 RPL39P40-201ENST00000445481 146 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.27□□□□□ -1.89
SRGAP3O43295 snoU13.14-201ENST00000459372 104 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 RNU7-23P-201ENST00000459465 62 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 AC112771.1-201ENST00000463581 102 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.27□□□□□ -1.89
SRGAP3O43295 AC096725.1-201ENST00000514266 313 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 AC025281.1-201ENST00000567026 265 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.27□□□□□ -1.89
SRGAP3O43295 AC004832.5-201ENST00000608677 401 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRGAP3O43295 AC134026.1-201ENST00000623249 2239 ntBASIC3.27□□□□□ -1.89
SRGAP3O43295 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRGAP3O43295 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SRGAP3O43295 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SRGAP3O43295 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SRGAP3O43295 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.26□□□□□ -1.89
SRGAP3O43295 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SRGAP3O43295 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
SRGAP3O43295 snoU2_19.1-201ENST00000362361 80 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 RNU6-655P-201ENST00000362858 107 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 Y_RNA.111-201ENST00000363248 100 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 RNU6-1210P-201ENST00000363775 107 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 RNU6-801P-201ENST00000364087 105 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 SNORD115-30-201ENST00000364117 82 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 RNU4-10P-201ENST00000364383 140 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 RNU6-275P-201ENST00000364910 107 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 Y_RNA.568-201ENST00000384742 113 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 SNORA26.7-201ENST00000391288 122 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.26□□□□□ -1.89
SRGAP3O43295 HMGN2P20-201ENST00000437531 273 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.26□□□□□ -1.89
SRGAP3O43295 RNU6-426P-201ENST00000516464 97 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 HSPE1P18-201ENST00000517602 280 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.26□□□□□ -1.89
SRGAP3O43295 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
SRGAP3O43295 AC023043.3-201ENST00000593113 385 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 AC010329.5-201ENST00000623497 2174 ntBASIC3.26□□□□□ -1.89
SRGAP3O43295 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SRGAP3O43295 RNU6-1048P-201ENST00000364054 107 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 Y_RNA.287-201ENST00000364853 94 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 RNU6-22P-201ENST00000384355 107 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 RNU6-959P-201ENST00000384671 107 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 MIR196B-201ENST00000384852 84 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 RNU6-381P-201ENST00000391259 108 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 RNA5SP504-201ENST00000410676 117 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 RNA5SP38-201ENST00000410750 119 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 SNORA59A-201ENST00000459326 152 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 AC005840.1-201ENST00000498412 377 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 RNA5SP272-201ENST00000516095 111 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 RNA5SP282-201ENST00000516355 108 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 RNU6-62P-201ENST00000516526 102 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 RNU2-44P-201ENST00000516795 194 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 AC006023.1-201ENST00000603944 259 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 AL078604.3-201ENST00000615580 211 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 AC013791.1-201ENST00000616619 62 ntBASIC3.25□□□□□ -1.89
SRGAP3O43295 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SRGAP3O43295 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SRGAP3O43295 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SRGAP3O43295 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SRGAP3O43295 RNU6-818P-201ENST00000364837 108 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 RNU6-750P-201ENST00000390946 107 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 SNORA12-201ENST00000391162 147 ntBASIC3.24□□□□□ -1.89
SRGAP3O43295 SNORA11.2-201ENST00000408318 127 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms