Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SNORA67.7-201ENST00000516664 135 ntBASIC3.7□□□□□ -1.82
RNF223E7ERA6 RNA5SP33-201ENST00000516687 98 ntBASIC3.7□□□□□ -1.82
RNF223E7ERA6 AC140658.3-201ENST00000567603 271 ntBASIC3.7□□□□□ -1.82
RNF223E7ERA6 MIR3158-1-201ENST00000583596 81 ntBASIC3.7□□□□□ -1.82
RNF223E7ERA6 MIR8059-201ENST00000620427 81 ntBASIC3.7□□□□□ -1.82
RNF223E7ERA6 AC140479.6-201ENST00000633535 357 ntBASIC3.7□□□□□ -1.82
RNF223E7ERA6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF223E7ERA6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF223E7ERA6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF223E7ERA6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF223E7ERA6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF223E7ERA6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RNF223E7ERA6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF223E7ERA6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF223E7ERA6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RNF223E7ERA6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF223E7ERA6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF223E7ERA6 Y_RNA.140-201ENST00000363474 103 ntBASIC3.69□□□□□ -1.82
RNF223E7ERA6 RNU6-546P-201ENST00000383991 107 ntBASIC3.69□□□□□ -1.82
RNF223E7ERA6 Y_RNA.470-201ENST00000384307 117 ntBASIC3.69□□□□□ -1.82
RNF223E7ERA6 AL135938.1-201ENST00000443141 297 ntBASIC3.69□□□□□ -1.82
RNF223E7ERA6 PHBP14-201ENST00000512887 367 ntBASIC3.69□□□□□ -1.82
RNF223E7ERA6 RNU6-523P-201ENST00000516304 54 ntBASIC3.69□□□□□ -1.82
RNF223E7ERA6 CYCSP40-201ENST00000575927 294 ntBASIC3.69□□□□□ -1.82
RNF223E7ERA6 MIR338-201ENST00000636369 67 ntBASIC3.69□□□□□ -1.82
RNF223E7ERA6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RNF223E7ERA6 CPHL1P-201ENST00000461341 3407 ntBASIC3.69□□□□□ -1.82
RNF223E7ERA6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNF223E7ERA6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
RNF223E7ERA6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF223E7ERA6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF223E7ERA6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF223E7ERA6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF223E7ERA6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF223E7ERA6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RNF223E7ERA6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF223E7ERA6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF223E7ERA6 SNORD115-37-201ENST00000363768 82 ntBASIC3.68□□□□□ -1.82
RNF223E7ERA6 GNG5P5-201ENST00000420444 220 ntBASIC3.68□□□□□ -1.82
RNF223E7ERA6 AC009969.1-201ENST00000438726 172 ntBASIC3.68□□□□□ -1.82
RNF223E7ERA6 AL162151.2-201ENST00000448875 158 ntBASIC3.68□□□□□ -1.82
RNF223E7ERA6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
RNF223E7ERA6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF223E7ERA6 RN7SKP18-201ENST00000516005 275 ntBASIC3.68□□□□□ -1.82
RNF223E7ERA6 RNU6-539P-201ENST00000516665 103 ntBASIC3.68□□□□□ -1.82
RNF223E7ERA6 MIR4286-201ENST00000580651 93 ntBASIC3.68□□□□□ -1.82
RNF223E7ERA6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF223E7ERA6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF223E7ERA6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF223E7ERA6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF223E7ERA6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF223E7ERA6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF223E7ERA6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF223E7ERA6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF223E7ERA6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF223E7ERA6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RNF223E7ERA6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-34-201ENST00000362441 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-12-201ENST00000362583 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-29-201ENST00000362834 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-9-201ENST00000362912 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-21-201ENST00000362963 81 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-14-201ENST00000363090 81 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-41-201ENST00000363608 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-11-201ENST00000363616 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-5-201ENST00000363633 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-39-201ENST00000363694 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-4-201ENST00000363810 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD38.1-201ENST00000363863 68 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-6-201ENST00000363942 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-42-201ENST00000364273 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 RNA5SP513-201ENST00000364648 118 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-15-201ENST00000364809 81 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-26-201ENST00000365067 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-10-201ENST00000365073 81 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-43-201ENST00000365503 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORD115-36-201ENST00000365629 82 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 RNU6-1319P-201ENST00000390855 104 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 RNU6-747P-201ENST00000390928 104 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 RNU6-241P-201ENST00000391148 104 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 SNORA11F-201ENST00000408237 128 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 RNU6-177P-201ENST00000411257 104 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 Z98742.3-201ENST00000418637 326 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 AL445685.2-201ENST00000422551 342 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 UBL5P1-201ENST00000507979 193 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 RNA5SP497-201ENST00000516081 97 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 RNU2-58P-201ENST00000516403 183 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 RPPH1-2P-201ENST00000516688 293 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 MIR6875-201ENST00000617506 72 ntBASIC3.67□□□□□ -1.82
RNF223E7ERA6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
RNF223E7ERA6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF223E7ERA6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF223E7ERA6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF223E7ERA6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF223E7ERA6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF223E7ERA6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF223E7ERA6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF223E7ERA6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms