Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.116-201ENST00000363292 103 ntBASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.307-201ENST00000365022 117 ntBASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.331-201ENST00000365267 102 ntBASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 AL137159.1-201ENST00000452808 512 ntBASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 MTND4LP30-201ENST00000454092 297 ntBASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 RPL39P38-201ENST00000467018 153 ntBASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 RNU6-107P-201ENST00000516643 102 ntBASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 AC005828.6-201ENST00000606610 232 ntBASIC3.17□□□□□ -1.9
CCDC85CA6NKD9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 AL391987.6-201ENST00000305671 199 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.237-201ENST00000364439 102 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.243-201ENST00000364481 109 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 RNA5SP492-201ENST00000411330 114 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 RPL19P1-201ENST00000411635 428 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 SUMO1P2-201ENST00000452524 304 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 RNU6-221P-201ENST00000459541 99 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 SERF1AP1-201ENST00000514575 187 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 RNU6-966P-201ENST00000516479 104 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 AC012433.1-201ENST00000588916 398 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.16□□□□□ -1.9
CCDC85CA6NKD9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.15□□□□□ -1.9
CCDC85CA6NKD9 AC135776.4-201ENST00000624300 1904 ntBASIC3.15□□□□□ -1.9
CCDC85CA6NKD9 MIR337-201ENST00000362281 93 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.16-201ENST00000362421 102 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.447-201ENST00000384184 113 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.478-201ENST00000384358 107 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 RNU6-1235P-201ENST00000384559 107 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 SRIP3-201ENST00000413200 219 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 AC123900.1-201ENST00000420390 96 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 MTCO1P44-201ENST00000441935 243 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 RNU6-498P-201ENST00000459468 107 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 RNU7-57P-201ENST00000459540 60 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 RPL23AP42-201ENST00000471152 471 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 AC107222.1-201ENST00000510899 637 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 MTND1P19-201ENST00000511780 315 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 RNU6-667P-201ENST00000517186 102 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 DEFB108E-201ENST00000524692 240 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 AC008749.1-201ENST00000597650 306 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 snoZ196.1-201ENST00000625269 89 ntBASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC85CA6NKD9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 SNORD56.5-201ENST00000364281 72 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 SNORA53-201ENST00000391141 249 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 MIR548H3-201ENST00000408771 118 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 AL357134.1-201ENST00000445848 426 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 RNU6-1023P-201ENST00000516137 106 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 RNU6-948P-201ENST00000516374 107 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 RNU2-31P-201ENST00000516954 155 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 RNU6-1271P-201ENST00000517049 105 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 AC087441.2-201ENST00000529141 262 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 AC006380.1-201ENST00000603598 186 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 AC007318.2-201ENST00000620999 243 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 AC006001.4-201ENST00000622243 395 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 AL159152.1-201ENST00000635019 2587 ntBASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC85CA6NKD9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 AC073325.2-201ENST00000339545 159 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 SNORD115-30-201ENST00000364117 82 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.352-201ENST00000365439 102 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 RNU6-438P-201ENST00000365561 103 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.569-201ENST00000384749 103 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 SNORD58.1-201ENST00000391313 66 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 RNA5SP21-201ENST00000410917 96 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 AC009238.1-201ENST00000442165 424 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 AC009237.6-201ENST00000446969 424 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 RNU6-155P-201ENST00000516347 100 ntBASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC85CA6NKD9 MTND5P6-201ENST00000422338 1798 ntBASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 SNORD114-7-201ENST00000362520 77 ntBASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.383-201ENST00000383855 97 ntBASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.418-201ENST00000384029 102 ntBASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 Y_RNA.489-201ENST00000384410 101 ntBASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
CCDC85CA6NKD9 POLR2KP2-201ENST00000438155 177 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms