Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 Y_RNA.483-201ENST00000384380 101 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 MIR887-201ENST00000401258 79 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 AC009963.1-201ENST00000417265 157 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 POLR2KP2-201ENST00000438155 177 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-966P-201ENST00000516479 104 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-856P-201ENST00000516959 98 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 U4.1-201ENST00000620349 87 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-702P-201ENST00000364982 107 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-290P-201ENST00000365212 101 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 Y_RNA.452-201ENST00000384202 108 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 Y_RNA.556-201ENST00000384677 113 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 AC003982.1-202ENST00000469928 248 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 AC025647.1-201ENST00000517879 253 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 AC008749.1-201ENST00000597650 306 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 AL590240.4-201ENST00000616908 390 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 U6.115-201ENST00000636045 103 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 AL159152.1-201ENST00000635019 2587 ntBASIC2.42□□□□□ -2.02
MBD3L4A6NDZ8 MAPK10-266ENST00000641066 6555 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-472P-201ENST00000384299 107 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 Y_RNA.541-201ENST00000384640 113 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 MT-TW-201ENST00000387382 68 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 MIR1253-201ENST00000408273 105 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-1203P-201ENST00000410703 110 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 RNA5SP270-201ENST00000411361 118 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 AL451074.5-201ENST00000415894 435 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 AC027419.1-201ENST00000522976 328 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 MIR3605-201ENST00000583214 100 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 AC037487.3-201ENST00000606668 112 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 SDR42E1P4-201ENST00000620894 481 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 AC093831.2-201ENST00000624393 3427 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 AC009487.4-201ENST00000624969 3585 ntBASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
MBD3L4A6NDZ8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.4□□□□□ -2.02
MBD3L4A6NDZ8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
MBD3L4A6NDZ8 SNORD81.1-201ENST00000363064 77 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-23P-201ENST00000363283 107 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 SNORD114-6-201ENST00000364393 72 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.288-201ENST00000364854 92 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-1240P-201ENST00000365155 104 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.383-201ENST00000383855 97 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 MIR29C-201ENST00000385231 88 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 SNORA53-201ENST00000391141 249 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 MRPS10P1-201ENST00000448483 130 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 AL139109.1-201ENST00000455491 297 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 AP004217.1-201ENST00000480579 346 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-1338P-201ENST00000516328 91 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 RNA5SP137-201ENST00000516833 135 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 DEFB108E-201ENST00000524692 240 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 AC087441.2-201ENST00000529141 262 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 MIR3684-201ENST00000579779 74 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 AP000942.4-201ENST00000604811 241 ntBASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
MBD3L4A6NDZ8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.16-201ENST00000362421 102 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 SNORD115-30-201ENST00000364117 82 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.569-201ENST00000384749 103 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 AL031003.1-201ENST00000404229 172 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 U3.40-201ENST00000408706 208 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-1199P-201ENST00000411249 104 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 AC016909.1-201ENST00000415916 166 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 AC244505.4-201ENST00000434905 287 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 AL121890.1-201ENST00000435457 205 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 SSXP5-201ENST00000443473 287 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 YWHAEP4-201ENST00000505390 198 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 SNORA9.3-201ENST00000516383 129 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 AC107871.2-201ENST00000612894 502 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.39□□□□□ -2.03
MBD3L4A6NDZ8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.193-201ENST00000363979 102 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-1164P-201ENST00000364428 107 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 Y_RNA.243-201ENST00000364481 109 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 RNU1-52P-201ENST00000384190 164 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-505P-201ENST00000384427 107 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 AC060773.1-201ENST00000421698 310 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 HMGN2P34-201ENST00000437647 269 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 AL513328.1-201ENST00000446460 224 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 SNORD65B-201ENST00000459126 73 ntBASIC2.38□□□□□ -2.03
MBD3L4A6NDZ8 RNU6-1041P-201ENST00000516254 102 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms