Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 Y_RNA.269-201ENST00000364685 89 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 RNU6-740P-201ENST00000364734 105 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 Y_RNA.329-201ENST00000365209 107 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 RNU6-438P-201ENST00000365561 103 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 MIR1185-2-201ENST00000408687 86 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 U3.40-201ENST00000408706 208 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 AC074290.1-201ENST00000448883 135 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 RNU7-57P-201ENST00000459540 60 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 AC114982.1-201ENST00000469402 321 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 RNU6-436P-201ENST00000516171 114 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 SNORA27.4-201ENST00000516650 95 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 SNORA48.11-201ENST00000517015 89 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 ELOCP29-201ENST00000588193 334 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 DEFB117-201ENST00000602356 141 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 AC009779.6-201ENST00000603972 165 ntBASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
TRBV5-3A0A0A0MS03 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU4-80P-201ENST00000363200 141 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-743P-201ENST00000364151 106 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 Y_RNA.275-201ENST00000364726 110 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU2-52P-201ENST00000410680 190 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU2-14P-201ENST00000411053 191 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC003685.2-201ENST00000422795 395 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC104332.2-201ENST00000429959 156 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 Z98949.2-201ENST00000440996 144 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 HMGN2P18-201ENST00000450680 270 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 snoU13.22-201ENST00000459428 104 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 AL162424.1-201ENST00000602325 221 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 AL033523.1-201ENST00000605153 153 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 U4.3-201ENST00000621047 82 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TRBV5-3A0A0A0MS03 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 UBE2WP1-201ENST00000362030 340 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 SNORD115-30-201ENST00000364117 82 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 Y_RNA.243-201ENST00000364481 109 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU1-51P-201ENST00000365345 176 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-975P-201ENST00000384296 105 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 MIR627-201ENST00000384979 97 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 MIR561-201ENST00000385216 97 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-1248P-201ENST00000391096 64 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 AL357139.1-201ENST00000407792 426 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 RN7SKP27-201ENST00000410684 333 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 AL445687.1-201ENST00000439946 251 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNA5SP490-201ENST00000517141 136 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 AL137790.1-201ENST00000634283 177 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 U6.115-201ENST00000636045 103 ntBASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.26□□□□□ -2.05
TRBV5-3A0A0A0MS03 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 Y_RNA.76-201ENST00000362931 109 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 Y_RNA.117-201ENST00000363294 101 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNY1-201ENST00000364228 113 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-200P-201ENST00000364743 107 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNA5SP125-201ENST00000364843 120 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU1-138P-201ENST00000384093 164 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-662P-201ENST00000384253 104 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 SNORD14D-201ENST00000384390 87 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 MT-TR-201ENST00000387439 65 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 AL031003.1-201ENST00000404229 172 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC024067.1-201ENST00000426199 223 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 Z96811.1-201ENST00000445880 108 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC016717.1-201ENST00000448918 286 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC016925.1-201ENST00000458303 298 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-138P-201ENST00000515952 107 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-191P-201ENST00000516295 94 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC130289.1-201ENST00000577321 73 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC090616.3-201ENST00000582184 217 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 AL442067.1-201ENST00000613261 223 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 snoZ196.1-201ENST00000625269 89 ntBASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRBV5-3A0A0A0MS03 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 MIR208A-201ENST00000362287 71 ntBASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 VTRNA1-1-201ENST00000363120 99 ntBASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 Y_RNA.122-201ENST00000363331 96 ntBASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 SNORD46.1-201ENST00000364139 104 ntBASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-1289P-201ENST00000384431 106 ntBASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 Y_RNA.590-201ENST00000410140 107 ntBASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-651P-201ENST00000411040 105 ntBASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU2-61P-201ENST00000411069 191 ntBASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-57P-201ENST00000411348 103 ntBASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.24□□□□□ -2.05
TRBV5-3A0A0A0MS03 RNU6-948P-201ENST00000516374 107 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms