Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 AC011373.1-201ENST00000607270 237 ntBASIC2.87□□□□□ -1.95
PCDHGA2Q9Y5H1 MIR6817-201ENST00000615588 66 ntBASIC2.87□□□□□ -1.95
PCDHGA2Q9Y5H1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHGA2Q9Y5H1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHGA2Q9Y5H1 AC009487.4-201ENST00000624969 3585 ntBASIC2.87□□□□□ -1.95
PCDHGA2Q9Y5H1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PCDHGA2Q9Y5H1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHGA2Q9Y5H1 AC135776.4-201ENST00000624300 1904 ntBASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 U3.8-201ENST00000363675 217 ntBASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 RNA5SP68-201ENST00000363885 119 ntBASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 SNORA38-201ENST00000363946 132 ntBASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 RNU6-1264P-201ENST00000383891 107 ntBASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 RNU1-109P-201ENST00000383960 147 ntBASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 SNORA67.4-201ENST00000384688 142 ntBASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 AP004217.1-201ENST00000480579 346 ntBASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 AC010615.1-201ENST00000594254 1764 ntBASIC2.86□□□□□ -1.95
PCDHGA2Q9Y5H1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 MIR335-201ENST00000362173 94 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 RNU4-90P-201ENST00000362773 141 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 RNU1-23P-201ENST00000363361 144 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 RNU6-1175P-201ENST00000365200 107 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 MIR1283-1-201ENST00000408494 87 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 HMGN2P35-201ENST00000412164 270 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 RNU6-1132P-201ENST00000459214 107 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 SRIP1-201ENST00000489235 288 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 MIR449C-201ENST00000516047 92 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 RNU1-117P-201ENST00000517041 158 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 AC110588.1-201ENST00000559699 137 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 AC022441.3-201ENST00000605737 136 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 AC007318.2-201ENST00000620999 243 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 MIR3674-201ENST00000636576 68 ntBASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHGA2Q9Y5H1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 Y_RNA.188-201ENST00000363952 111 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 SNORD87-201ENST00000364849 89 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 SNORA25B-201ENST00000365507 128 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 AL138827.1-201ENST00000402666 306 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 Y_RNA.602-201ENST00000410535 92 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 RNA5SP475-201ENST00000410568 110 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 RNA5SP21-201ENST00000410917 96 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 RPL23AP36-201ENST00000413895 458 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 AC139712.2-201ENST00000424302 339 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 HSPE1P25-201ENST00000455484 251 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 RNU6-965P-201ENST00000516721 96 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 RNU7-110P-201ENST00000516891 62 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 RNA5SP490-201ENST00000517141 136 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 MIR3684-201ENST00000579779 74 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 AC004467.1-201ENST00000615678 330 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 AP001282.2-201ENST00000616149 309 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 AC127459.3-201ENST00000624328 466 ntBASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHGA2Q9Y5H1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
PCDHGA2Q9Y5H1 ZNF658B-202ENST00000615961 3375 ntBASIC2.84□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 SNORA72.2-201ENST00000365028 127 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.541-201ENST00000384640 113 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-21P-201ENST00000384710 107 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 MIR181B1-201ENST00000385240 110 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 TOMM22P2-201ENST00000430735 237 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 HMGN2P18-201ENST00000450680 270 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 AL137159.1-201ENST00000452808 512 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 snoU13.23-201ENST00000458863 104 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU2-34P-201ENST00000516534 121 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 AC055872.1-201ENST00000570978 278 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 MIR1248-201ENST00000629190 106 ntBASIC2.83□□□□□ -1.96
PCDHGA2Q9Y5H1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.14-201ENST00000362415 103 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-290P-201ENST00000365212 101 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.350-201ENST00000365409 98 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-102P-201ENST00000384485 104 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.562-201ENST00000384695 113 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 SRIP3-201ENST00000413200 219 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 AC245102.2-201ENST00000448956 180 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 AC016925.1-201ENST00000458303 298 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 ATP5EP1-201ENST00000510257 156 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 AC096725.1-201ENST00000514266 313 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-1338P-201ENST00000516328 91 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-948P-201ENST00000516374 107 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-107P-201ENST00000516643 102 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-1271P-201ENST00000517049 105 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 AP002001.1-203ENST00000534002 267 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 AC091932.3-201ENST00000624223 323 ntBASIC2.82□□□□□ -1.96
PCDHGA2Q9Y5H1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms