Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.65-201ENST00000362846 100 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-961P-201ENST00000363893 105 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-209P-201ENST00000384118 107 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 MIR196B-201ENST00000384852 84 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 MIR181A2-201ENST00000384863 110 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 MIR586-201ENST00000385035 97 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.581-201ENST00000391017 97 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 SNORD88.1-201ENST00000408684 91 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 RNA5SP475-201ENST00000410568 110 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 RNU2-32P-201ENST00000411193 191 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 RNA5SP508-201ENST00000411327 119 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 ELOCP21-201ENST00000412558 336 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 MTND2P29-201ENST00000438595 412 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 HSPE1P25-201ENST00000455484 251 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 SEPT14P8-201ENST00000508026 178 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-496P-201ENST00000516145 99 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 RNU1-117P-201ENST00000517041 158 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 AC109329.2-201ENST00000519658 482 ntBASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 AC135776.4-201ENST00000624300 1904 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 MIR410-201ENST00000362222 80 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 U3.8-201ENST00000363675 217 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.269-201ENST00000364685 89 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.274-201ENST00000364714 101 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 SNORA72.2-201ENST00000365028 127 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 U8.9-201ENST00000365667 134 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 SNORA67.2-201ENST00000384300 149 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.515-201ENST00000384535 112 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 RPL23AP36-201ENST00000413895 458 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 AC092427.1-202ENST00000430569 476 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 AC074290.1-201ENST00000448883 135 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 SUMO1P2-201ENST00000452524 304 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 TRBV12-1-201ENST00000479785 344 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 MIR449C-201ENST00000516047 92 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-107P-201ENST00000516643 102 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 MIR4423-201ENST00000580922 80 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 SNORD113-5-201ENST00000607261 78 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 AC008873.1-201ENST00000625051 138 ntBASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHB1Q9Y5F3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.78□□□□□ -1.97
PCDHB1Q9Y5F3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.78□□□□□ -1.97
PCDHB1Q9Y5F3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 MIR335-201ENST00000362173 94 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-1266P-201ENST00000362794 105 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 SNORD31B-201ENST00000364977 69 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 MIR548H3-201ENST00000408771 118 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 RAB28P5-201ENST00000427490 651 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 AC114982.1-201ENST00000469402 321 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 AC003982.1-202ENST00000469928 248 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 MIR4753-201ENST00000585119 83 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 ZNF861P-201ENST00000588126 639 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 MIR3674-201ENST00000636576 68 ntBASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHB1Q9Y5F3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 SNORD81.1-201ENST00000363064 77 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-200P-201ENST00000364743 107 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 Y_RNA.478-201ENST00000384358 107 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-21P-201ENST00000384710 107 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 Y_RNA.570-201ENST00000384750 101 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 AL357139.1-201ENST00000407792 426 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 RNA5SP504-201ENST00000410676 117 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 RPL23AP3-201ENST00000453844 468 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 SRIP1-201ENST00000489235 288 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 RNU7-110P-201ENST00000516891 62 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 AC009779.6-201ENST00000603972 165 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 AL365434.2-201ENST00000607979 234 ntBASIC2.76□□□□□ -1.97
PCDHB1Q9Y5F3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 AC009487.4-201ENST00000624969 3585 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 RNU4-90P-201ENST00000362773 141 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 SNORD87-201ENST00000364849 89 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 RNU6-438P-201ENST00000365561 103 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 MIR181B1-201ENST00000385240 110 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 SNORA26.7-201ENST00000391288 122 ntBASIC2.75□□□□□ -1.97
PCDHB1Q9Y5F3 MIR1283-1-201ENST00000408494 87 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms