Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 Y_RNA.539-201ENST00000384635 107 ntBASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 MIR561-201ENST00000385216 97 ntBASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 SNORA53-201ENST00000391141 249 ntBASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 MIR1185-2-201ENST00000408687 86 ntBASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 AC104389.3-201ENST00000445629 235 ntBASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 AC091953.5-201ENST00000622919 233 ntBASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.24□□□□□ -1.89
R3HCC1Q9Y3T6 RNU1-35P-201ENST00000362782 153 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 Y_RNA.277-201ENST00000364754 102 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 Y_RNA.352-201ENST00000365439 102 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-418P-201ENST00000384035 107 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-975P-201ENST00000384296 105 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 SNORD14D-201ENST00000384390 87 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 MIR592-201ENST00000384959 97 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 MIR548H3-201ENST00000408771 118 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 MTCO1P5-201ENST00000433573 344 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-991P-201ENST00000516168 107 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 AC007318.2-201ENST00000620999 243 ntBASIC3.23□□□□□ -1.89
R3HCC1Q9Y3T6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 Y_RNA.20-201ENST00000362479 113 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 Y_RNA.54-201ENST00000362766 105 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-1266P-201ENST00000362794 105 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 Y_RNA.136-201ENST00000363444 102 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 SNORD115-30-201ENST00000364117 82 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-438P-201ENST00000365561 103 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-851P-201ENST00000384565 107 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 MIR128-1-201ENST00000384921 82 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 AL357139.1-201ENST00000407792 426 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 U3.40-201ENST00000408706 208 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-436P-201ENST00000516171 114 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-111P-201ENST00000517179 105 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 RNU6-667P-201ENST00000517186 102 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 RN7SKP40-201ENST00000517211 242 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 RPL21P9-201ENST00000556149 474 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 MIR4643-201ENST00000577473 78 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 MIR3200-201ENST00000580767 85 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 DEFB117-201ENST00000602356 141 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 AC006380.1-201ENST00000603598 186 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 U2.14-201ENST00000615943 113 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 U6.115-201ENST00000636045 103 ntBASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.22□□□□□ -1.89
R3HCC1Q9Y3T6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
R3HCC1Q9Y3T6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-525P-201ENST00000363685 104 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 Y_RNA.329-201ENST00000365209 107 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 SNORA9.2-201ENST00000365361 133 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 SNORA25B-201ENST00000365507 128 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 SNORA48.2-201ENST00000390926 124 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 SRIP1-201ENST00000489235 288 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-794P-201ENST00000517261 64 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 AC005000.2-201ENST00000605468 310 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 AC025754.2-201ENST00000606491 432 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
R3HCC1Q9Y3T6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 RNU4-80P-201ENST00000363200 141 ntBASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 Y_RNA.243-201ENST00000364481 109 ntBASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 Y_RNA.478-201ENST00000384358 107 ntBASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 Z92545.1-201ENST00000411782 234 ntBASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 HMGN2P35-201ENST00000412164 270 ntBASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 AC093259.1-201ENST00000509755 300 ntBASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 snoZ196.1-201ENST00000625269 89 ntBASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
R3HCC1Q9Y3T6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 SNORA25.1-201ENST00000362326 128 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 Y_RNA.44-201ENST00000362676 108 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-324P-201ENST00000363957 106 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 Y_RNA.332-201ENST00000365271 113 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-57P-201ENST00000411348 103 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 AC010531.2-201ENST00000465012 153 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 S100A11P2-201ENST00000467589 312 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 AC114982.1-201ENST00000469402 321 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 AC091959.1-201ENST00000495857 238 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 AC037487.3-201ENST00000606668 112 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 AC090115.4-201ENST00000609970 188 ntBASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
R3HCC1Q9Y3T6 MIR340-201ENST00000362125 95 ntBASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 RNU6-338P-201ENST00000383888 105 ntBASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 AL031003.1-201ENST00000404229 172 ntBASIC3.18□□□□□ -1.9
R3HCC1Q9Y3T6 EEF1A1P41-201ENST00000414667 207 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms