Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TOMM22P2-201ENST00000430735 237 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 RPS29P31-201ENST00000446147 164 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 RPL26P9-201ENST00000457466 433 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-1183P-201ENST00000517054 60 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 LINC00933-203ENST00000559812 219 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 MIR4738-201ENST00000579134 87 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 MIR3529-201ENST00000637713 78 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 SNORD9-201ENST00000362566 104 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-414P-201ENST00000363705 104 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 SNORA38.1-201ENST00000364172 131 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 Y_RNA.265-201ENST00000364677 108 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 AL451046.2-201ENST00000403074 277 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 HSPE1P26-201ENST00000405341 275 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-402P-201ENST00000410678 103 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 AC007064.1-201ENST00000412238 351 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-1256P-201ENST00000516539 103 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 AL365205.2-201ENST00000594586 68 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 YPEL5P2-201ENST00000605553 359 ntBASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.61□□□□□ -1.67
PDZRN3Q9UPQ7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 MIR423-201ENST00000362201 94 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 Y_RNA.344-201ENST00000365381 112 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-1323P-201ENST00000384025 107 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 MIR518C-201ENST00000384822 101 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 AC005326.1-201ENST00000429197 123 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-267P-201ENST00000516714 103 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-703P-201ENST00000516946 107 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 CR383656.8-201ENST00000549046 145 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 MIR4513-201ENST00000581077 86 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 MIR8058-201ENST00000615737 89 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 MIR8057-201ENST00000620957 69 ntBASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.6□□□□□ -1.67
PDZRN3Q9UPQ7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 RNY3P2-201ENST00000362918 102 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 SNORD115-13-201ENST00000363358 82 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 SNORD115-16-201ENST00000363887 82 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 RNA5SP42-201ENST00000364278 115 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 SNORD115-1-201ENST00000364961 82 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 MT-TI-201ENST00000387365 69 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 AL117342.1-201ENST00000404861 406 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 AL139281.1-201ENST00000422120 335 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 AC008155.2-201ENST00000464337 397 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 KC877373.1-201ENST00000479066 408 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 RPL23AP54-201ENST00000495129 419 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 RNU7-61P-201ENST00000515897 61 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 SNORD77.4-201ENST00000516158 81 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 SNORA31.23-201ENST00000517219 133 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 AC007751.1-201ENST00000529260 376 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 AC105245.1-201ENST00000581934 244 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 AC068205.3-201ENST00000636385 468 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 AP000553.6-201ENST00000641242 118 ntBASIC4.59□□□□□ -1.67
PDZRN3Q9UPQ7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 AC007656.2-201ENST00000624902 4547 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 RNU1-133P-201ENST00000364867 167 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 SNORD116-13-201ENST00000384408 92 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 SNORA48.2-201ENST00000390926 124 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 AC019205.3-201ENST00000424573 156 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 AC079780.1-201ENST00000428259 207 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 AC115115.1-201ENST00000449927 248 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 AC011406.1-201ENST00000512440 370 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 RNU2-27P-201ENST00000516185 142 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 RNU6-162P-201ENST00000516228 103 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 RNU6-344P-201ENST00000516635 111 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 DEFB131E-201ENST00000532329 154 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 MIR4644-201ENST00000579929 84 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 SNORD11B-201ENST00000607707 90 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 U7.3-201ENST00000616123 62 ntBASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.58□□□□□ -1.68
PDZRN3Q9UPQ7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.57□□□□□ -1.68
PDZRN3Q9UPQ7 Y_RNA.124-201ENST00000363339 93 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms