Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC009487.4-201ENST00000624969 3585 ntBASIC3.68□□□□□ -1.82
CNTN3Q9P232 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN3Q9P232 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN3Q9P232 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN3Q9P232 SNORA27.1-201ENST00000362604 124 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 RNU6-486P-201ENST00000363116 107 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 Y_RNA.333-201ENST00000365274 102 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 RNU6-407P-201ENST00000365280 104 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 Y_RNA.353-201ENST00000365440 108 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 Y_RNA.420-201ENST00000384043 110 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 AC010154.1-201ENST00000425857 269 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 RPS27P1-201ENST00000450552 247 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 RNU6-221P-201ENST00000459541 99 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 RNU6-1333P-201ENST00000516162 93 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 RNU6-1337P-201ENST00000516525 95 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTN3Q9P232 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTN3Q9P232 AC090517.3-201ENST00000625170 141 ntBASIC3.67□□□□□ -1.82
CNTN3Q9P232 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTN3Q9P232 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.67□□□□□ -1.82
CNTN3Q9P232 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN3Q9P232 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN3Q9P232 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN3Q9P232 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CNTN3Q9P232 Y_RNA.124-201ENST00000363339 93 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 Y_RNA.218-201ENST00000364218 104 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 Y_RNA.261-201ENST00000364631 102 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 Y_RNA.521-201ENST00000384560 114 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 Y_RNA.542-201ENST00000384641 111 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 RNA5SP120-201ENST00000410900 112 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.66□□□□□ -1.82
CNTN3Q9P232 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTN3Q9P232 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTN3Q9P232 RNU7-197P-201ENST00000458836 62 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 RNU6-1211P-201ENST00000459179 105 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 SNORA70.19-201ENST00000516717 90 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTN3Q9P232 MIR4276-201ENST00000584832 70 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 AC005972.2-201ENST00000604690 348 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 AC012640.5-201ENST00000623897 319 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 AC073346.2-201ENST00000624724 2058 ntBASIC3.66□□□□□ -1.82
CNTN3Q9P232 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
CNTN3Q9P232 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
CNTN3Q9P232 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNTN3Q9P232 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CNTN3Q9P232 RNU6-80P-201ENST00000384195 107 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 RNU6-975P-201ENST00000384296 105 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 SNORA20-201ENST00000384662 132 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 RNU6-383P-201ENST00000410864 94 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.65□□□□□ -1.83
CNTN3Q9P232 SNORD65B-201ENST00000459126 73 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 RPS26P55-201ENST00000471178 356 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 AC006483.1-201ENST00000487308 313 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 SCARNA11.3-201ENST00000517276 130 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 NDUFB9P3-201ENST00000521269 501 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 AC127455.1-201ENST00000565496 145 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.65□□□□□ -1.83
CNTN3Q9P232 POLR3GP1-201ENST00000594073 261 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 AP001340.1-201ENST00000624405 217 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 Z83843.1-201ENST00000604070 3685 ntBASIC3.65□□□□□ -1.83
CNTN3Q9P232 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CNTN3Q9P232 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.64□□□□□ -1.83
CNTN3Q9P232 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNTN3Q9P232 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
CNTN3Q9P232 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
CNTN3Q9P232 RNU6-234P-201ENST00000365229 104 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 Y_RNA.393-201ENST00000383936 102 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 SNORD20-201ENST00000384550 80 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 RNA5SP496-201ENST00000391240 109 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 SNORA11.1-201ENST00000408133 129 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.64□□□□□ -1.83
CNTN3Q9P232 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.64□□□□□ -1.83
CNTN3Q9P232 RPL27AP5-201ENST00000469428 449 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 RN7SL807P-201ENST00000470923 297 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 AC083906.5-201ENST00000503722 328 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 RNU6-561P-201ENST00000516222 102 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 AC109329.2-201ENST00000519658 482 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.64□□□□□ -1.83
CNTN3Q9P232 AC006435.5-201ENST00000624486 112 ntBASIC3.64□□□□□ -1.83
CNTN3Q9P232 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNTN3Q9P232 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CNTN3Q9P232 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.63□□□□□ -1.83
CNTN3Q9P232 SNORD31B-201ENST00000364977 69 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 RNU6-215P-201ENST00000365169 102 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 SNORA9-201ENST00000384215 133 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 AL512604.1-201ENST00000404812 257 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 SNORA79-201ENST00000408376 140 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 AC010401.1-201ENST00000463867 348 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.63□□□□□ -1.83
CNTN3Q9P232 RNU6-948P-201ENST00000516374 107 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.63□□□□□ -1.83
CNTN3Q9P232 AL161756.2-201ENST00000604597 246 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 SNORA50A-202ENST00000629536 136 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
CNTN3Q9P232 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CNTN3Q9P232 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
CNTN3Q9P232 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNTN3Q9P232 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CNTN3Q9P232 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms