Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UBP1Q9NZI7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
UBP1Q9NZI7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.26□□□□□ -1.89
UBP1Q9NZI7 Y_RNA.121-201ENST00000363309 113 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 SNORD56.3-201ENST00000363507 71 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 RNU6-418P-201ENST00000384035 107 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 RNU6-746P-201ENST00000384112 109 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 Y_RNA.571-201ENST00000384753 98 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 RPS26P55-201ENST00000471178 356 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.26□□□□□ -1.89
UBP1Q9NZI7 AC093259.1-201ENST00000509755 300 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 RNU1-143P-201ENST00000516296 146 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 SUMO2P18-201ENST00000518873 252 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.26□□□□□ -1.89
UBP1Q9NZI7 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 MIR5688-201ENST00000580619 83 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 MIR3944-201ENST00000581277 108 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 AC090115.4-201ENST00000609970 188 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 U1.23-201ENST00000610293 146 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 RNU1-68P-201ENST00000615382 146 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 U1.39-201ENST00000621562 146 ntBASIC3.26□□□□□ -1.89
UBP1Q9NZI7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
UBP1Q9NZI7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
UBP1Q9NZI7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
UBP1Q9NZI7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.25□□□□□ -1.89
UBP1Q9NZI7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
UBP1Q9NZI7 Y_RNA.124-201ENST00000363339 93 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 RNU6-1240P-201ENST00000365155 104 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 Y_RNA.332-201ENST00000365271 113 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UBP1Q9NZI7 RNVU1-14-201ENST00000384770 164 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 MIR7-3-201ENST00000384898 110 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 MTCO2P33-201ENST00000402100 465 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 SNORA11.1-201ENST00000408133 129 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 AL513477.1-202ENST00000417061 214 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 AC123900.1-201ENST00000420390 96 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 RPL36AP21-201ENST00000490372 323 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.25□□□□□ -1.89
UBP1Q9NZI7 AC013412.1-201ENST00000610687 192 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 uc_338.25-201ENST00000613756 156 ntBASIC3.25□□□□□ -1.89
UBP1Q9NZI7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBP1Q9NZI7 RNU6-144P-201ENST00000383951 107 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 SNORA8.3-201ENST00000384679 139 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 SNORA48.8-201ENST00000391324 134 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.24□□□□□ -1.89
UBP1Q9NZI7 MTCO1P44-201ENST00000441935 243 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 RPS20P10-201ENST00000451209 253 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 RNU7-141P-201ENST00000459304 62 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.24□□□□□ -1.89
UBP1Q9NZI7 RNU6-1219P-201ENST00000516143 112 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 MRPS18CP4-201ENST00000535821 231 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 PRELID2P1-201ENST00000552837 301 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 MIR3117-201ENST00000584034 78 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 AC096577.2-201ENST00000611455 153 ntBASIC3.24□□□□□ -1.89
UBP1Q9NZI7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBP1Q9NZI7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UBP1Q9NZI7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBP1Q9NZI7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UBP1Q9NZI7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UBP1Q9NZI7 MAPK10-266ENST00000641066 6555 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.23□□□□□ -1.89
UBP1Q9NZI7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
UBP1Q9NZI7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
UBP1Q9NZI7 SNORA63.1-201ENST00000362493 131 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 RNU6-1205P-201ENST00000363625 106 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 Y_RNA.238-201ENST00000364441 102 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 Y_RNA.293-201ENST00000364908 93 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 RNU6-805P-201ENST00000365643 106 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
UBP1Q9NZI7 RNU2-48P-201ENST00000410694 191 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 AC005326.1-201ENST00000429197 123 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 CR769767.1-201ENST00000436337 346 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 AC010531.2-201ENST00000465012 153 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 AC074198.2-201ENST00000508153 258 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 SNORA4.4-201ENST00000515921 135 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 RN7SKP164-201ENST00000516138 266 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 RNU6-1337P-201ENST00000516525 95 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 Y_RNA.802-201ENST00000614892 130 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 AC073476.4-201ENST00000628409 72 ntBASIC3.23□□□□□ -1.89
UBP1Q9NZI7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
UBP1Q9NZI7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
UBP1Q9NZI7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UBP1Q9NZI7 RNU6-1048P-201ENST00000364054 107 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 RNU6-743P-201ENST00000364151 106 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 RNU6-407P-201ENST00000365280 104 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 MIR526A2-201ENST00000390198 65 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 RN7SKP51-201ENST00000410781 304 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 AL451074.5-201ENST00000415894 435 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 HSPE1P21-201ENST00000438283 308 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 AL392103.1-201ENST00000447000 198 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.22□□□□□ -1.89
UBP1Q9NZI7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.22□□□□□ -1.89
UBP1Q9NZI7 AC091826.1-201ENST00000514065 313 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 RNA5SP217-201ENST00000515959 91 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 RNA5SP20-201ENST00000515976 84 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 RNU6-1278P-201ENST00000516130 107 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
UBP1Q9NZI7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.22□□□□□ -1.89
UBP1Q9NZI7 AC084757.4-201ENST00000616350 526 ntBASIC3.22□□□□□ -1.89
UBP1Q9NZI7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms