Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNA5SP281-201ENST00000516504 135 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 RNU4-77P-201ENST00000516692 156 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 SNORD53-201ENST00000579969 78 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 AC104984.5-201ENST00000586878 94 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 AL357075.2-201ENST00000614906 189 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 CTSLP2-204ENST00000629029 392 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 AL606534.2-204ENST00000635008 178 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SLC6A13Q9NSD5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 SNORA67.4-201ENST00000384688 142 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 MIR597-201ENST00000384968 97 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 SNORD12B-201ENST00000410433 91 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 MTCO3P19-201ENST00000415864 321 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 RNU6-221P-201ENST00000459541 99 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 Y_RNA.631-201ENST00000459607 101 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 AP005660.1-201ENST00000522972 293 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 AC023442.1-201ENST00000531247 422 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 AC006157.1-201ENST00000611750 366 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 AC083806.3-201ENST00000614016 455 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 AC134503.1-201ENST00000633048 54 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 AL159152.1-201ENST00000635019 2587 ntBASIC2.06□□□□□ -2.08
SLC6A13Q9NSD5 MTND5P6-201ENST00000422338 1798 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 Y_RNA.27-201ENST00000362540 103 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 RNU6-1264P-201ENST00000383891 107 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 SNORD78.2-201ENST00000391076 69 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 ELOCP21-201ENST00000412558 336 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 MCFD2P1-201ENST00000417812 300 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 MTCO2P12-201ENST00000427426 682 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 TOMM22P2-201ENST00000430735 237 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 RPL23AP7-203ENST00000449021 469 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 SNORA40.9-201ENST00000515895 93 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 RNA5SP24-201ENST00000516478 95 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 SNORA40.14-201ENST00000516543 86 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 RN7SKP295-201ENST00000517264 153 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 AC005786.1-201ENST00000588553 154 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 MIR6715A-201ENST00000615929 79 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 AC064859.1-201ENST00000624741 174 ntBASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SLC6A13Q9NSD5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 Y_RNA.128-201ENST00000363391 112 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 SNORA70B-201ENST00000384210 135 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 RNU6-474P-201ENST00000384243 107 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 MIR1185-2-201ENST00000408687 86 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 PMCHL1-202ENST00000423102 261 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 MTND4P19-201ENST00000446659 478 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 FCF1P4-201ENST00000448326 183 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 ATP5J2P3-201ENST00000451550 258 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 RNU6-475P-201ENST00000516073 104 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 RNU6-107P-201ENST00000516643 102 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 SUMO2P18-201ENST00000518873 252 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 AC018448.1-201ENST00000552843 316 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 MIR5188-201ENST00000583467 113 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 SNORD58B-201ENST00000607313 66 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 AC007485.1-201ENST00000616755 206 ntBASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SLC6A13Q9NSD5 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 Y_RNA.31-201ENST00000362574 102 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 Y_RNA.138-201ENST00000363462 102 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 RNU6-308P-201ENST00000390957 107 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 MIR548P-201ENST00000408336 84 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 AC008134.1-201ENST00000420943 193 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 AC060773.1-201ENST00000421698 310 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 AL160004.2-201ENST00000432935 350 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 RNU6-625P-201ENST00000459412 107 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 GNAI2P1-201ENST00000541815 315 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 AL353149.1-201ENST00000610667 244 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 ZNF72P-201ENST00000425869 1908 ntBASIC2.03□□□□□ -2.08
SLC6A13Q9NSD5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 MIR410-201ENST00000362222 80 ntBASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 MRPL35P1-201ENST00000404272 572 ntBASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 HMGN2P38-201ENST00000423806 265 ntBASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 AC011406.1-201ENST00000512440 370 ntBASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 RNU6-1012P-201ENST00000516606 109 ntBASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 Y_RNA.701-201ENST00000516812 110 ntBASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 AC025647.1-201ENST00000517879 253 ntBASIC2.02□□□□□ -2.09
SLC6A13Q9NSD5 AC006001.4-201ENST00000622243 395 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms