Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 ELOCP20-201ENST00000422460 345 ntBASIC2.59□□□□□ -1.99
VPS45Q9NRW7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS45Q9NRW7 AC027124.2-201ENST00000428249 105 ntBASIC2.59□□□□□ -1.99
VPS45Q9NRW7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS45Q9NRW7 AL731563.1-201ENST00000442202 214 ntBASIC2.59□□□□□ -1.99
VPS45Q9NRW7 AC007395.1-201ENST00000451333 677 ntBASIC2.59□□□□□ -1.99
VPS45Q9NRW7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.59□□□□□ -1.99
VPS45Q9NRW7 RNA5SP402-201ENST00000517148 110 ntBASIC2.59□□□□□ -1.99
VPS45Q9NRW7 AC026271.5-201ENST00000577873 130 ntBASIC2.59□□□□□ -1.99
VPS45Q9NRW7 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -1.99
VPS45Q9NRW7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.59□□□□□ -2
VPS45Q9NRW7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
VPS45Q9NRW7 RNU6-770P-201ENST00000363929 105 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 RNU6-926P-201ENST00000384075 107 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 RNU6-713P-201ENST00000384761 107 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 RNU2-48P-201ENST00000410694 191 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 SRIP3-201ENST00000413200 219 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.58□□□□□ -2
VPS45Q9NRW7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.58□□□□□ -2
VPS45Q9NRW7 AL356320.1-201ENST00000429616 163 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 AC004386.2-201ENST00000441858 148 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 DYNLT3P2-201ENST00000442517 295 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 PCNPP5-201ENST00000452246 481 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.58□□□□□ -2
VPS45Q9NRW7 RNY3P15-201ENST00000516297 97 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.58□□□□□ -2
VPS45Q9NRW7 AC009127.3-201ENST00000570531 403 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.58□□□□□ -2
VPS45Q9NRW7 AC130454.1-201ENST00000622948 401 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 MTND5P35-201ENST00000557537 1720 ntBASIC2.58□□□□□ -2
VPS45Q9NRW7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VPS45Q9NRW7 Y_RNA.19-201ENST00000362462 99 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 RNU6-944P-201ENST00000364023 107 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 SNORA18.2-201ENST00000383865 132 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 RNU6-26P-201ENST00000383985 107 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
VPS45Q9NRW7 AL079342.1-201ENST00000401460 267 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 RN7SKP223-201ENST00000410582 62 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 EDDM3CP-201ENST00000415977 425 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 AL591806.2-201ENST00000433122 173 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 AC245102.2-201ENST00000448956 180 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.57□□□□□ -2
VPS45Q9NRW7 AC091179.3-201ENST00000474761 144 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.57□□□□□ -2
VPS45Q9NRW7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.57□□□□□ -2
VPS45Q9NRW7 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 MIR4503-201ENST00000582187 83 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 MIR5006-201ENST00000583027 110 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 MZT1P2-201ENST00000604387 248 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 AC011476.5-201ENST00000615594 130 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 U4.1-201ENST00000620349 87 ntBASIC2.57□□□□□ -2
VPS45Q9NRW7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
VPS45Q9NRW7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.56□□□□□ -2
VPS45Q9NRW7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
VPS45Q9NRW7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VPS45Q9NRW7 RNA5SP456-201ENST00000364002 114 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 Y_RNA.452-201ENST00000384202 108 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 MIR29C-201ENST00000385231 88 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.56□□□□□ -2
VPS45Q9NRW7 AC009237.7-201ENST00000447357 229 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 RNA5SP320-201ENST00000516263 124 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 RNU6-344P-201ENST00000516635 111 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 RNU2-44P-201ENST00000516795 194 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 RNU6-667P-201ENST00000517186 102 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 DEFB131C-201ENST00000528817 165 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 AL161670.1-201ENST00000554348 137 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.56□□□□□ -2
VPS45Q9NRW7 MYL12BP1-201ENST00000569826 507 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.56□□□□□ -2
VPS45Q9NRW7 MIR3149-201ENST00000584629 83 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 AC078899.2-201ENST00000595282 212 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 AC025754.2-201ENST00000606491 432 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 SNORD14A-201ENST00000606526 91 ntBASIC2.56□□□□□ -2
VPS45Q9NRW7 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.56□□□□□ -2
VPS45Q9NRW7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS45Q9NRW7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.56□□□□□ -2
VPS45Q9NRW7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
VPS45Q9NRW7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VPS45Q9NRW7 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
VPS45Q9NRW7 Y_RNA.556-201ENST00000384677 113 ntBASIC2.55□□□□□ -2
VPS45Q9NRW7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VPS45Q9NRW7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.55□□□□□ -2
VPS45Q9NRW7 AC074133.1-201ENST00000515696 183 ntBASIC2.55□□□□□ -2
VPS45Q9NRW7 SNORA40.9-201ENST00000515895 93 ntBASIC2.55□□□□□ -2
VPS45Q9NRW7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.55□□□□□ -2
VPS45Q9NRW7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.55□□□□□ -2
VPS45Q9NRW7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
VPS45Q9NRW7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.55□□□□□ -2
VPS45Q9NRW7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS45Q9NRW7 LINC02555-201ENST00000563933 1951 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
VPS45Q9NRW7 Y_RNA.143-201ENST00000363520 106 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 RNU6-574P-201ENST00000384265 107 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 Y_RNA.512-201ENST00000384518 102 ntBASIC2.54□□□□□ -2
VPS45Q9NRW7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms