Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIR548AI-201ENST00000579940 88 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 AC008739.2-201ENST00000597006 317 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 TCL6_2.1-201ENST00000615162 119 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 U3.9-201ENST00000363823 204 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 Y_RNA.238-201ENST00000364441 102 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 SNORA18.2-201ENST00000383865 132 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 RNU6-763P-201ENST00000390865 106 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 U8.19-201ENST00000459095 133 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 RNU6-237P-201ENST00000515985 71 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 RNU6-344P-201ENST00000516635 111 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 AC027176.1-201ENST00000560204 514 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 MIR5006-201ENST00000583027 110 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 AL391813.1-201ENST00000603098 260 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 SNORD11B-201ENST00000607707 90 ntBASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PDLIM7Q9NR12 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 RNU6-81P-201ENST00000365608 104 ntBASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 MIR186-201ENST00000384988 86 ntBASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 Y_RNA.580-201ENST00000391004 95 ntBASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 RNA5SP504-201ENST00000410676 117 ntBASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 AC009414.1-201ENST00000427200 443 ntBASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 SCGB1D5P-201ENST00000515134 247 ntBASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDLIM7Q9NR12 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 Y_RNA.182-201ENST00000363880 111 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 RNU4-17P-201ENST00000365598 141 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 Y_RNA.412-201ENST00000384001 104 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 BMS1P22-201ENST00000414726 313 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 AC112771.1-201ENST00000463581 102 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 RNU2-44P-201ENST00000516795 194 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 uc_338.14-201ENST00000613162 166 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 MTND1P7-201ENST00000632801 297 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 AC068205.3-201ENST00000636385 468 ntBASIC3.3□□□□□ -1.88
PDLIM7Q9NR12 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 snoU2_19.1-201ENST00000362361 80 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 RNU6-655P-201ENST00000362858 107 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 RNU6-1210P-201ENST00000363775 107 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 RNU6-801P-201ENST00000364087 105 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 RNU6-1083P-201ENST00000384022 107 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 AL031003.1-201ENST00000404229 172 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 AC087499.2-201ENST00000432861 149 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 AL135790.2-201ENST00000437701 267 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 RPS3P1-201ENST00000456781 192 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 AC091179.1-201ENST00000461606 579 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 RPS27AP9-201ENST00000477681 438 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 RNU1-41P-201ENST00000516161 162 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 RNU1-48P-201ENST00000516400 162 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 AC079600.2-201ENST00000550076 130 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 AC099778.2-201ENST00000610904 211 ntBASIC3.29□□□□□ -1.88
PDLIM7Q9NR12 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 SNORD115-30-201ENST00000364117 82 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 RNU6-312P-201ENST00000364629 107 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 RNU6-449P-201ENST00000383914 107 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 RNU6-851P-201ENST00000384565 107 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 SNORA46-201ENST00000384762 135 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 RPL23AP58-201ENST00000440453 469 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 SNORD109B-201ENST00000458961 67 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 SNORD109A-201ENST00000459128 67 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 SCARNA11.3-201ENST00000517276 130 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 HSPE1P18-201ENST00000517602 280 ntBASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PDLIM7Q9NR12 AC096644.4-201ENST00000563417 2912 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 AC138915.1-201ENST00000565427 1685 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.23-201ENST00000362496 106 ntBASIC3.27□□□□□ -1.89
PDLIM7Q9NR12 Y_RNA.75-201ENST00000362927 97 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms