Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNU2-44P-201ENST00000516795 194 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 CYCSP23-201ENST00000519781 313 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.26□□□□□ -2.05
DDX4Q9NQI0 MIR5695-201ENST00000579717 85 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 MIR3171-201ENST00000584270 74 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.26□□□□□ -2.05
DDX4Q9NQI0 AC005296.1-201ENST00000616145 209 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.26□□□□□ -2.05
DDX4Q9NQI0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
DDX4Q9NQI0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
DDX4Q9NQI0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.80-201ENST00000362996 102 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 SNORA63-201ENST00000363450 132 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.202-201ENST00000364083 110 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 RNU6-1026P-201ENST00000384465 108 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.526-201ENST00000384572 110 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
DDX4Q9NQI0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 MTND4P19-201ENST00000446659 478 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 AL163540.1-201ENST00000485382 386 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.25□□□□□ -2.05
DDX4Q9NQI0 RNA5SP458-201ENST00000516188 119 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 UBL5P4-201ENST00000562584 236 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 AC006600.1-201ENST00000572529 153 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 SNORD11B-201ENST00000607707 90 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 AC010999.1-201ENST00000611856 324 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 AC138305.3-201ENST00000624988 240 ntBASIC2.25□□□□□ -2.05
DDX4Q9NQI0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
DDX4Q9NQI0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
DDX4Q9NQI0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
DDX4Q9NQI0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
DDX4Q9NQI0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
DDX4Q9NQI0 RNU6-281P-201ENST00000384212 103 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 RNU6-793P-201ENST00000384233 104 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 MIR300-201ENST00000401138 83 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 MTCO3P8-201ENST00000453691 755 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 RNU7-169P-201ENST00000459456 61 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 AC107032.1-201ENST00000485945 480 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 RPS27P21-201ENST00000486977 252 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 RNU4-77P-201ENST00000516692 156 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 RNU6-965P-201ENST00000516721 96 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 RNU6-1153P-201ENST00000516760 105 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 RNU6-667P-201ENST00000517186 102 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 AC022868.1-201ENST00000517767 391 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 AC034114.1-201ENST00000520293 285 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 DEFB131C-201ENST00000528817 165 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 NDUFA5P6-201ENST00000542110 379 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 AC093023.1-201ENST00000547375 507 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 AL442163.3-201ENST00000554110 156 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.24□□□□□ -2.05
DDX4Q9NQI0 AL132822.1-201ENST00000617063 513 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.24□□□□□ -2.05
DDX4Q9NQI0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.24□□□□□ -2.05
DDX4Q9NQI0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
DDX4Q9NQI0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
DDX4Q9NQI0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.31-201ENST00000362574 102 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.179-201ENST00000363844 90 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 RNU6-879P-201ENST00000364328 108 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 RNY3P4-201ENST00000384428 101 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 RNU1-148P-201ENST00000384472 162 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 MIR17-201ENST00000385012 84 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 RNU6-308P-201ENST00000390957 107 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.23□□□□□ -2.05
DDX4Q9NQI0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.23□□□□□ -2.05
DDX4Q9NQI0 AL160004.2-201ENST00000432935 350 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 AC007395.1-201ENST00000451333 677 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 RNU7-14P-201ENST00000459331 62 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 AC025033.1-201ENST00000463883 194 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 AC018868.1-201ENST00000491307 315 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.23□□□□□ -2.05
DDX4Q9NQI0 MIR449C-201ENST00000516047 92 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.683-201ENST00000516508 93 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 MIR4529-201ENST00000578110 78 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 AC125232.2-201ENST00000592457 143 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 AC007485.1-201ENST00000616755 206 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 AC005592.1-201ENST00000566527 1640 ntBASIC2.23□□□□□ -2.05
DDX4Q9NQI0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.27-201ENST00000362540 103 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 RNU6-1301P-201ENST00000362724 104 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.148-201ENST00000363557 117 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 SNORD31B-201ENST00000364977 69 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 SNORA22B-201ENST00000383876 138 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 RNU2-48P-201ENST00000410694 191 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 SRIP3-201ENST00000413200 219 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.22□□□□□ -2.05
DDX4Q9NQI0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.22□□□□□ -2.05
DDX4Q9NQI0 AC112492.4-201ENST00000456549 352 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 AC093852.1-201ENST00000503587 266 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 RN7SKP49-201ENST00000516675 260 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 MIR514B-201ENST00000516774 80 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 RNA5SP490-201ENST00000517141 136 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 HSBP1P1-201ENST00000555205 166 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 AP000942.3-201ENST00000603702 160 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 MIR8081-201ENST00000611533 95 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 MIR1248-201ENST00000629190 106 ntBASIC2.22□□□□□ -2.05
DDX4Q9NQI0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.22□□□□□ -2.05
DDX4Q9NQI0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.21□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms