Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC136932.1-201ENST00000574771 208 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 AC090616.3-201ENST00000582184 217 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.9□□□□□ -1.95
VTA1Q9NP79 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VTA1Q9NP79 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VTA1Q9NP79 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VTA1Q9NP79 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VTA1Q9NP79 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VTA1Q9NP79 Y_RNA.64-201ENST00000362845 102 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 RNU1-23P-201ENST00000363361 144 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 Y_RNA.518-201ENST00000384552 113 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 MIR518C-201ENST00000384822 101 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 MIR181B1-201ENST00000385240 110 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 Y_RNA.581-201ENST00000391017 97 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 RNA5SP504-201ENST00000410676 117 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 SRIP3-201ENST00000413200 219 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.89□□□□□ -1.95
VTA1Q9NP79 AC009238.1-201ENST00000442165 424 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 AC009237.6-201ENST00000446969 424 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 AL137159.1-201ENST00000452808 512 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 RNU6-948P-201ENST00000516374 107 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 RNU1-117P-201ENST00000517041 158 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 AC022441.3-201ENST00000605737 136 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.89□□□□□ -1.95
VTA1Q9NP79 AC135776.4-201ENST00000624300 1904 ntBASIC2.89□□□□□ -1.95
VTA1Q9NP79 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
VTA1Q9NP79 Y_RNA.288-201ENST00000364854 92 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 RNU6-937P-201ENST00000384325 106 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 RNU6-21P-201ENST00000384710 107 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 RNU6-121P-201ENST00000410525 99 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 RNA5SP492-201ENST00000411330 114 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 RPL19P1-201ENST00000411635 428 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 AL121890.1-201ENST00000435457 205 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 HMGN2P18-201ENST00000450680 270 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 HMGN2P9-201ENST00000476875 229 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.88□□□□□ -1.95
VTA1Q9NP79 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
VTA1Q9NP79 RNU6-107P-201ENST00000516643 102 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 RNA5SP490-201ENST00000517141 136 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 NDUFA5P6-201ENST00000542110 379 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.88□□□□□ -1.95
VTA1Q9NP79 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.88□□□□□ -1.95
VTA1Q9NP79 AC104984.5-201ENST00000586878 94 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 MIR1248-201ENST00000629190 106 ntBASIC2.88□□□□□ -1.95
VTA1Q9NP79 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VTA1Q9NP79 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VTA1Q9NP79 SNORD113-8-201ENST00000363497 74 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 RNU6-1175P-201ENST00000365200 107 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 SNORA25B-201ENST00000365507 128 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 Y_RNA.461-201ENST00000384263 103 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 MT-TG-201ENST00000387429 68 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 RNU2-48P-201ENST00000410694 191 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 AC005042.3-201ENST00000453230 174 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 RPS27AP9-201ENST00000477681 438 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.87□□□□□ -1.95
VTA1Q9NP79 AC093259.1-201ENST00000509755 300 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 MIR449C-201ENST00000516047 92 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 RNU6-826P-201ENST00000516827 104 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.87□□□□□ -1.95
VTA1Q9NP79 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.87□□□□□ -1.95
VTA1Q9NP79 AC006380.1-201ENST00000603598 186 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.87□□□□□ -1.95
VTA1Q9NP79 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.87□□□□□ -1.95
VTA1Q9NP79 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VTA1Q9NP79 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
VTA1Q9NP79 MIR335-201ENST00000362173 94 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 Y_RNA.222-201ENST00000364264 102 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 Y_RNA.332-201ENST00000365271 113 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 Y_RNA.376-201ENST00000365638 108 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 RNU6-975P-201ENST00000384296 105 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 SNORA3.2-201ENST00000408221 125 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 MIR1185-2-201ENST00000408687 86 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 RNU2-54P-201ENST00000410299 190 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 HMGN2P35-201ENST00000412164 270 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.86□□□□□ -1.95
VTA1Q9NP79 AC123900.1-201ENST00000420390 96 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 TRBVB-201ENST00000477100 408 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 RNU6-496P-201ENST00000516145 99 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 Y_RNA.668-201ENST00000516233 93 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 RPPH1-2P-201ENST00000516688 293 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 RNU7-110P-201ENST00000516891 62 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.86□□□□□ -1.95
VTA1Q9NP79 AC004467.1-201ENST00000615678 330 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 MIR6715A-201ENST00000615929 79 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 AL590240.4-201ENST00000616908 390 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.86□□□□□ -1.95
VTA1Q9NP79 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.86□□□□□ -1.95
VTA1Q9NP79 ZNF658B-202ENST00000615961 3375 ntBASIC2.86□□□□□ -1.95
VTA1Q9NP79 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.85□□□□□ -1.95
VTA1Q9NP79 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.85□□□□□ -1.95
VTA1Q9NP79 RNA5SP289-201ENST00000362332 137 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 RNU6-545P-201ENST00000362681 104 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 Y_RNA.84-201ENST00000363011 104 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 VTRNA1-1-201ENST00000363120 99 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 SNORD87-201ENST00000364849 89 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 RNU6-1235P-201ENST00000384559 107 ntBASIC2.85□□□□□ -1.95
VTA1Q9NP79 RNU6-1203P-201ENST00000410703 110 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms