Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 RNU4-11P-201ENST00000365287 132 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 RNU6-959P-201ENST00000384671 107 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 MIR23B-201ENST00000384832 97 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 MIR449B-201ENST00000384995 97 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 MIR569-201ENST00000385228 96 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 AC123900.1-201ENST00000420390 96 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 AC002075.2-201ENST00000425207 252 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 MTCO1P44-201ENST00000441935 243 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 AL357134.1-201ENST00000445848 426 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 SNORA70.18-201ENST00000516696 98 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 AL449363.1-201ENST00000617815 186 ntBASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.8□□□□□ -1.8
VRTNQ9H8Y1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 RNU6-643P-201ENST00000384018 107 ntBASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 MIR200C-201ENST00000384980 68 ntBASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 Y_RNA.586-201ENST00000391146 98 ntBASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 MIR513C-201ENST00000401352 84 ntBASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 AC003685.2-201ENST00000422795 395 ntBASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 RPL21P129-201ENST00000491732 478 ntBASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 RNU2-27P-201ENST00000516185 142 ntBASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 AC015720.1-201ENST00000565251 277 ntBASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VRTNQ9H8Y1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 AC068647.1-201ENST00000489539 2265 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RNU6-199P-201ENST00000362954 107 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RNU6-674P-201ENST00000363831 107 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RNU6-117P-201ENST00000365415 107 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RNU6-136P-201ENST00000384663 107 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RNA5SP496-201ENST00000391240 109 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 AC104332.2-201ENST00000429959 156 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 AC110768.1-201ENST00000509222 400 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RNA5SP272-201ENST00000516095 111 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RNU6-62P-201ENST00000516526 102 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 AC026333.2-201ENST00000542164 106 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 AC093732.2-201ENST00000607950 274 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
VRTNQ9H8Y1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
VRTNQ9H8Y1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 RNA5SP119-201ENST00000362715 117 ntBASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 Y_RNA.332-201ENST00000365271 113 ntBASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 AL512604.1-201ENST00000404812 257 ntBASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 RPL30P13-201ENST00000418873 348 ntBASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 AC025750.2-201ENST00000442609 450 ntBASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 RNU6-991P-201ENST00000516168 107 ntBASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 AC012640.5-201ENST00000623897 319 ntBASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 SNORA50A-202ENST00000629536 136 ntBASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 MIR3658-201ENST00000636291 56 ntBASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
VRTNQ9H8Y1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 AL355596.1-201ENST00000565399 3996 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 AC010332.2-201ENST00000613083 1904 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 RNU4-41P-201ENST00000364426 143 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 RNU6-417P-201ENST00000384712 107 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 MIR627-201ENST00000384979 97 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 SNORD37.2-201ENST00000391075 66 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 MIR1253-201ENST00000408273 105 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 AL445687.1-201ENST00000439946 251 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 AC091826.1-201ENST00000514065 313 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 AC107934.2-201ENST00000518653 310 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 MIR4738-201ENST00000579134 87 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 MIR3922-201ENST00000585192 84 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 MIR4438-201ENST00000585271 93 ntBASIC3.76□□□□□ -1.81
VRTNQ9H8Y1 MIR92B-201ENST00000607575 96 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms